RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SLC5A6Q9Y289 635 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 ARPC5O15511 151 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 OR2F2O95006 317 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 CD8AP01732 235 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 AMY2AP04746 511 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 UBBP0CG47 229 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 MGMTP16455 207 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 ZP3P21754 424 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 TAS2R31P59538 309 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 RPS27AP62979 156 aaKnown RBP11.67□□□□□ -0.54
CPSF7-223ENST00000544669 UBA52P62987 128 aaKnown RBP11.67□□□□□ -0.54
CPSF7-223ENST00000544669 OR2F1Q13607 317 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 ZNF345Q14585 488 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 OR7A5Q15622 319 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 ACTBL2Q562R1 376 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 FAM209AQ5JX71 171 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 STPG1Q5TH74 334 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 TMEM71Q6P5X7 295 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 PGAP1Q75T13 922 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 CHMP1BQ7LBR1 199 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 KANSL1Q7Z3B3 1105 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 OR2W3Q7Z3T1 314 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 GPAT4Q86UL3 456 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 BPHLQ86WA6 291 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-223ENST00000544669 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
CPSF7-223ENST00000544669 CCDC54Q8NEL0 328 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 OR2AJ1Q8NGZ0 328 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 SLC22A8Q8TCC7 542 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 STT3BQ8TCJ2 826 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 ELP5Q8TE02 316 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 RNF138Q8WVD3 245 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 ZNF524Q96C55 264 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 DUSP23Q9BVJ7 150 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 MFFQ9GZY8 342 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 DNTTIP1Q9H147 329 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 POFUT1Q9H488 388 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 SPEF1Q9Y4P9 236 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 SLCO1B1Q9Y6L6 691 aa11.67□□□□□ -0.54
CPSF7-223ENST00000544669 COL5A1P20908 1838 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 FXYD6-FXYD2A0A087WZ82 144 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 TLX3O43711 291 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 GMFGO60234 142 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 ONECUT2O95948 504 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 SLC25A4P12235 298 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 PTHLHP12272 177 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 ZNF35P13682 527 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 RAB3AP20336 220 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 ADH6P28332 368 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 LAP3P28838 519 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 UBE2MP61081 183 aaKnown RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 TAGLNQ01995 201 aaKnown RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 MFGE8Q08431 387 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 ARL6IP1Q15041 203 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 PAPD4Q6PIY7 484 aaKnown RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-223ENST00000544669 BPIFB2Q8N4F0 458 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 BMPERQ8N8U9 685 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 OR8S1Q8NH09 359 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 AQP3Q92482 292 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 PHYHIPLQ96FC7 376 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 FXYD6Q9H0Q3 95 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 KLHL13Q9P2N7 655 aa11.66□□□□□ -0.54
CPSF7-223ENST00000544669 DCDC2BA2VCK2 349 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 LIPT2A6NK58 231 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 BCAT2O15382 392 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-223ENST00000544669 SYT7O43581 403 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 ALOX12BO75342 701 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 ZFAND5O76080 213 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 GPANK1O95872 356 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 CYCSP99999 105 aaKnown RBP11.65□□□□□ -0.54
CPSF7-223ENST00000544669 MELKQ14680 651 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 RGS7BPQ6MZT1 257 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-223ENST00000544669 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-223ENST00000544669 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 UEVLDQ8IX04 471 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 BEST3Q8N1M1 668 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 OR1M1Q8NGA1 313 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 OR5M1Q8NGP8 315 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 CDC6Q99741 560 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 OR11A1Q9GZK7 315 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 PPP4R1LQ9P1A2 415 aa11.65□□□□□ -0.54
CPSF7-223ENST00000544669 GDF2Q9UK05 429 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-223ENST00000544669 MRPS18BQ9Y676 258 aaKnown RBP11.65□□□□□ -0.54
CPSF7-223ENST00000544669 A0A087WV48 116 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 LOC102725191A0A1B0GVB3 256 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 CPED1A4D0V7 1026 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 MBTPS2O43462 519 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 KDM4BO94953 1096 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 CFDP00746 253 aaPredicted RBP11.65□□□□□ -0.55
CPSF7-223ENST00000544669 IGHG1P01857 330 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 IFNA6P05013 189 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 FBXO45P0C2W1 286 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 GIMD1P0DJR0 217 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 CD34P28906 385 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 CD96P40200 585 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 CBX5P45973 191 aa11.65□□□□□ -0.55
CPSF7-223ENST00000544669 H2BFSP57053 126 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms