RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	CPA3	P15088	417 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	TCP1	P17987	556 aa	Known RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	CBL	P22681	906 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	FKBP2	P26885	142 aa	Known RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	NTS	P30990	170 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	MAP3K8	P41279	467 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	IDH3G	P51553	393 aa	Predicted RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	PRPS1	P60891	318 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	TGFBR3	Q03167	851 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	LGALS3BP	Q08380	585 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF415	Q09FC8	603 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	GAMT	Q14353	236 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	TRADD	Q15628	312 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	GABRA6	Q16445	453 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	TMEM107	Q6UX40	140 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	B3GLCT	Q6Y288	498 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	TMPPE	Q6ZT21	453 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	CROCCP3	Q8IVE0	287 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	LRRC8A	Q8IWT6	810 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	ODF3L1	Q8IXM7	274 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	C17orf78	Q8N4C9	275 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	PRR26	Q8N8Z3	221 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	CCDC63	Q8NA47	563 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	NOA1	Q8NC60	698 aa	Known RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	ATP6V1C2	Q8NEY4	427 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	FGFBP3	Q8TAT2	258 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	GPR119	Q8TDV5	335 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	PIK3R3	Q92569	461 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF75CP	Q92670	426 aa	Predicted RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	APH1A	Q96BI3	265 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	SH3YL1	Q96HL8	342 aa	Predicted RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	AMDHD1	Q96NU7	426 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	SORCS2	Q96PQ0	1159 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	C1QTNF6	Q9BXI9	259 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	BPESC1	Q9GZL8	116 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	GLIPR2	Q9H4G4	154 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	METTL17	Q9H7H0	456 aa	Predicted RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585		Q9H8V8	135 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	MIEF1	Q9NQG6	463 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	FAM118A	Q9NWS6	357 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF224	Q9NZL3	707 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	SNX12	Q9UMY4	172 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	NOSIP	Q9Y314	301 aa	Known RBP	5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	SNX24	Q9Y343	169 aa		5.18	□□□□□ -1.58
CPSF7-222	ENST00000544585	IGKV3D-15	A0A087WSY6	115 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	IGLV5-52	A0A0A0MRZ9	124 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585		A0A1W2PR80	420 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	LRP5L	A4QPB2	252 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	PRSS46	E5RG02	174 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585		F8VVB4	439 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585		F8VWA3	439 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	SULT2B1	O00204	365 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	EIF4E2	O60573	245 aa	Known RBP	5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	OR4F21	O95013	312 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	ALOX5	P09917	674 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	SHC1	P29353	583 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	HMOX2	P30519	316 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	PPOX	P50336	477 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	HILS1	P60008	231 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	SLC34A1	Q06495	639 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	SELENBP1	Q13228	472 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	PDE7A	Q13946	482 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	SLC25A53	Q5H9E4	307 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	TECRL	Q5HYJ1	363 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	FAM71E1	Q6IPT2	247 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	KDM8	Q8N371	416 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF786	Q8N393	782 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	LRRC17	Q8N6Y2	441 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	WDR31	Q8NA23	367 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	GATS	Q8NAP1	163 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	FAM76A	Q8TAV0	307 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZHX1-C8orf76	Q96EF9	292 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	KCNS3	Q9BQ31	491 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	MRPL57	Q9BQC6	102 aa	Known RBP	5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	COQ10B	Q9H8M1	238 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	SLC17A5	Q9NRA2	495 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	GIN1	Q9NXP7	522 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	DAPK2	Q9UIK4	370 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	ZNF225	Q9UK10	706 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	PYCARD	Q9ULZ3	195 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	ICAM5	Q9UMF0	924 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	AURKC	Q9UQB9	309 aa		5.17	□□□□□ -1.58
CPSF7-222	ENST00000544585	ARFGEF3	Q5TH69	2177 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	IGHV3-15	A0A0B4J1V0	119 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585		A0A0B4J203	849 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585		E9PI62	339 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	ARPC2	O15144	300 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	NOL3	O60936	208 aa	Known RBP	5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	SUPT7L	O94864	414 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	MT-ATP6	P00846	226 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	CRYAA	P02489	173 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	RPS17	P08708	135 aa	Known RBP	5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	PSG1	P11464	419 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	DAO	P14920	347 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	ANPEP	P15144	967 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	AREG	P15514	252 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	ATP6V1C1	P21283	382 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	MAGEA4	P43358	317 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	CAMLG	P49069	296 aa		5.16	□□□□□ -1.58
CPSF7-222	ENST00000544585	SERPINB8	P50452	374 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms