RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 KIAA0040Q15053 153 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ZMYND11Q15326 602 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 UAP1Q16222 522 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 MAPK14Q16539 360 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 SLC36A2Q495M3 483 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 UNC50Q53HI1 259 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 WBP2NLQ6ICG8 309 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 SLC35E4Q6ICL7 350 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TYW3Q6IPR3 259 aaKnown RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 C5orf46Q6UWT4 87 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 RNF144BQ7Z419 303 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 MOGAT3Q86VF5 341 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 UEVLDQ8IX04 471 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 C20orf196Q8IYI0 205 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 C1orf87Q8N0U7 546 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM123Q8N131 208 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 OR4C13Q8NGP0 309 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 OR6N1Q8NGY5 312 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 RP9Q8TA86 221 aaKnown RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 PNPT1Q8TCS8 783 aaKnown RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 GEMIN6Q8WXD5 167 aaKnown RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TRIM63Q969Q1 353 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 SLC35G5Q96KT7 338 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TSSK3Q96PN8 268 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 SIGLEC11Q96RL6 698 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ARHGDIGQ99819 225 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 TRIM31Q9BZY9 425 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 DPY30Q9C005 99 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 MMP28Q9H239 520 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 OR51B6Q9H340 312 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 RANBP3Q9H6Z4 567 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 MID1IP1Q9NPA3 183 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ZNRD1Q9P1U0 126 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 IL19Q9UHD0 177 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 ATP6V1HQ9UI12 483 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 RPUSD1Q9UJJ7 312 aaKnown RBP3.36□□□□□ -1.87
SNHG1-220ENST00000544550 FOXJ3Q9UPW0 622 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 PPP1R3CQ9UQK1 317 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 PLCE1Q9P212 2302 aa3.36□□□□□ -1.87
SNHG1-220ENST00000544550 A0A0U1RQK1 487 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A18PA6NE21 464 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A16PA6NEW6 464 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 LRRC30A6NM36 301 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A9PA6NNJ1 464 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A5PA8MXJ8 464 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FTCDNL1E5RQL4 147 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM178BH3BS89 294 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 AP3D1O14617 1153 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 CFLARO15519 480 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SPRY2O43597 315 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TIMM8AO60220 97 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 NPIPB7O75200 414 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 BCAS1O75363 584 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 LYPLA1O75608 230 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A15PP0C7V4 464 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A14PP0C7W9 464 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TMEM225BP0DP42 221 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 CCL2P13500 99 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 MMP9P14780 707 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 IL7RP16871 459 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 EFNA1P20827 205 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TUBG1P23258 451 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 AHCYP23526 432 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ATP5F1P24539 256 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 PHBP35232 272 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SOAT1P35610 550 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 MAGEA12P43365 314 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SERPINB9P50453 376 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ARHGDIAP52565 204 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TXNL4AP83876 142 aaKnown RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 CAV1Q03135 178 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 HSF2Q03933 536 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 EPS8Q12929 822 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 CHI3L2Q15782 390 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 KCNJ8Q15842 424 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TIGD6Q17RP2 521 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 XKR7Q5GH72 579 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 PHYHD1Q5SRE7 291 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 TEX35Q5T0J7 233 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 THEM4Q5T1C6 240 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM69AQ5T7M9 428 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ATPAF1Q5TC12 328 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 CARD17Q5XLA6 110 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 FAM90A2PQ658T7 463 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ARL9Q6T311 187 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 RNF165Q6ZSG1 346 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 C1orf122Q6ZSJ8 110 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 H1FNTQ75WM6 255 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 C6orf120Q7Z4R8 191 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 NET1Q7Z628 596 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 LCA5Q86VQ0 697 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 VRK2Q86Y07 508 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SKA3Q8IX90 412 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 KLHL7Q8IXQ5 586 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 KDM8Q8N371 416 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 SLC22A24Q8N4F4 322 aa3.35□□□□□ -1.87
SNHG1-220ENST00000544550 PAQR4Q8N4S7 273 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 PNLDC1Q8NA58 520 aaKnown RBP3.35□□□□□ -1.87
SNHG1-220ENST00000544550 ADPRHL1Q8NDY3 354 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms