RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 OR2T2Q6IF00 324 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 ACOT7LQ6ZUV0 252 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 DOK3Q7L591 496 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 FUNDC1Q8IVP5 155 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 PELI3Q8N2H9 469 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 CMBLQ96DG6 245 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 KCPQ6ZWJ8 1503 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 OR2J2O76002 312 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 RPL12P30050 165 aaKnown RBP14.12□□□□□ -0.15
CHD4-210ENST00000544040 SLC25A32Q9H2D1 315 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 WNT11O96014 354 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 HIST1H1CP16403 213 aaKnown RBP14.12□□□□□ -0.15
CHD4-210ENST00000544040 KLHDC9Q8NEP7 349 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 ACTR3CQ9C0K3 210 aaPredicted RBP14.12□□□□□ -0.15
CHD4-210ENST00000544040 SEMA6CQ9H3T2 930 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 PPT2Q9UMR5 302 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 ZNF835Q9Y2P0 537 aa14.12□□□□□ -0.15
CHD4-210ENST00000544040 A0A1W2PPQ1 181 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 ZNF749O43361 778 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 SLC35E2P0CK97 266 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 DUSP5Q16690 384 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 SYT11Q9BT88 431 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 RTL8AQ9BWD3 113 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 TMEM38AQ9H6F2 299 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 GAREM1Q9H706 876 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 LOC102724200A0A096LPH7 203 aaPredicted RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 A0A1W2PPH5 198 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 CPEP16870 476 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 GABRB1P18505 474 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 GPR12P47775 334 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 TRMT12Q53H54 448 aaKnown RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 ANKRD34AQ69YU3 496 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 DEFB108BQ8NET1 73 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 NAT6Q93015 286 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 PHOX2AO14813 284 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 JUNBP17275 347 aaPredicted RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 USF1P22415 310 aaPredicted RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 PTRH1Q86Y79 214 aaKnown RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 DTWD2Q8NBA8 298 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 OR5AP2Q8NGF4 316 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 RDH5Q92781 318 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 OR8B4Q96RC9 309 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 SLC5A6Q9Y289 635 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 M0R082 166 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 TAAR5O14804 337 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 LRP3O75074 770 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 GLAP06280 429 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 YRDCQ86U90 279 aaKnown RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 SMIM7Q9BQ49 75 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 NXF2Q9GZY0 626 aaKnown RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 CITO14578 2027 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 C4orf47A7E2U8 309 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 HRH1P35367 487 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 RBP2P50120 134 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 ASAH1Q13510 395 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 HSF5Q4G112 596 aaPredicted RBP14.11□□□□□ -0.15
CHD4-210ENST00000544040 NUDCD2Q8WVJ2 157 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 LHX4Q969G2 390 aa14.11□□□□□ -0.15
CHD4-210ENST00000544040 J3QR89 54 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CSNK1G2P78368 415 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 KLHDC8BQ8IXV7 354 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 GPR32P1Q8NGA4 272 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 OR4C5Q8NGB2 326 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 ENDOGQ14249 297 aaKnown RBP14.1□□□□□ -0.15
CHD4-210ENST00000544040 KCNAB1Q14722 419 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 RABEPKQ7Z6M1 372 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CDC20BQ86Y33 519 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CMTM4Q8IZR5 234 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 AUNIPQ9H7T9 357 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 USP3Q9Y6I4 520 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 QDPRP09417 244 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 SCGB1C2P0DMR2 95 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 NQO2P16083 231 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 PSMB6P28072 239 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 HNRNPA3P51991 378 aaKnown RBP14.1□□□□□ -0.15
CHD4-210ENST00000544040 FAM71E1Q6IPT2 247 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 ACSM5Q6NUN0 579 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 OR10P1Q8NGE3 313 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CHST6Q9GZX3 395 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CSNK1G1Q9HCP0 422 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 PLSCR3Q9NRY6 295 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CORINQ9Y5Q5 1042 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 TPOP07202 933 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 SBK2P0C263 348 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 RPS27P42677 84 aaKnown RBP14.1□□□□□ -0.15
CHD4-210ENST00000544040 SLAMF6Q96DU3 332 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CRLF2Q9HC73 371 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 PSENENQ9NZ42 101 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 PIAS2O75928 621 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 FABP1P07148 127 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CHRM2P08172 466 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 SLC25A4P12235 298 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 ACOT6Q3I5F7 207 aaPredicted RBP14.1□□□□□ -0.15
CHD4-210ENST00000544040 ANKRD16Q6P6B7 361 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 USP51Q70EK9 711 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 ORAI1Q96D31 301 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 CSF3RQ99062 836 aa14.1□□□□□ -0.15
CHD4-210ENST00000544040 ZNF346Q9UL40 294 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms