RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 APOBEC3AP31941 199 aaPredicted RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 TEX30Q5JUR7 227 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 ELFN2Q5R3F8 820 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 AADACL4Q5VUY2 407 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 TMEM154Q6P9G4 183 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 ZNF771Q7L3S4 317 aaPredicted RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 ZNF101Q8IZC7 436 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 FBXL14Q8N1E6 418 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 MUC15Q8N387 334 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 GALNT4Q8N4A0 578 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 OR6N2Q8NGY6 317 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 OR1F12Q8NHA8 337 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 FAM81AQ8TBF8 368 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 TMEM171Q8WVE6 324 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 TEAD3Q99594 435 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 HDHD2Q9H0R4 259 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 ZNF442Q9H7R0 627 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 FAIMQ9NVQ4 179 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 ATPIF1Q9UII2 106 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 NDRG4Q9ULP0 352 aaKnown RBP13.01□□□□□ -0.33
CD9-210ENST00000543916 EDARQ9UNE0 448 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
CD9-210ENST00000543916 SELENOFO60613 162 aa13□□□□□ -0.33
CD9-210ENST00000543916 ICMTO60725 284 aa13□□□□□ -0.33
CD9-210ENST00000543916 DBHP09172 617 aa13□□□□□ -0.33
CD9-210ENST00000543916 OR4A8P0C604 315 aa13□□□□□ -0.33
CD9-210ENST00000543916 PCSK6P29122 969 aa13□□□□□ -0.33
CD9-210ENST00000543916 NAA10P41227 235 aaPredicted RBP13□□□□□ -0.33
CD9-210ENST00000543916 UCP2P55851 309 aa13□□□□□ -0.33
CD9-210ENST00000543916 CDC42P60953 191 aa13□□□□□ -0.33
CD9-210ENST00000543916 ERVS71-1P61550 626 aa13□□□□□ -0.33
CD9-210ENST00000543916 MST1LQ2TV78 715 aa13□□□□□ -0.33
CD9-210ENST00000543916 OGFRL1Q5TC84 451 aaPredicted RBP13□□□□□ -0.33
CD9-210ENST00000543916 AGAP6Q5VW22 663 aa13□□□□□ -0.33
CD9-210ENST00000543916 RFPL4BQ6ZWI9 263 aa13□□□□□ -0.33
CD9-210ENST00000543916 DCXRQ7Z4W1 244 aa13□□□□□ -0.33
CD9-210ENST00000543916 ST7LQ8TDW4 575 aa13□□□□□ -0.33
CD9-210ENST00000543916 UBE2FQ969M7 185 aa13□□□□□ -0.33
CD9-210ENST00000543916 MBD6Q96DN6 1003 aa13□□□□□ -0.33
CD9-210ENST00000543916 PITX2Q99697 317 aa13□□□□□ -0.33
CD9-210ENST00000543916 COQ7Q99807 217 aa13□□□□□ -0.33
CD9-210ENST00000543916 ROS1P08922 2347 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 OVOL3O00110 214 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 SMPD2O60906 423 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 GLRXP35754 106 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 SERPINF1P36955 418 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 EIF2B1Q14232 305 aaKnown RBP12.99□□□□□ -0.33
CD9-210ENST00000543916 RSPO1Q2MKA7 263 aaPredicted RBP12.99□□□□□ -0.33
CD9-210ENST00000543916 DEFB113Q30KQ7 82 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 NXNL2Q5VZ03 156 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
CD9-210ENST00000543916 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 PACRGLQ8N7B6 248 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 OR8J1Q8NGP2 316 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 PIGTQ969N2 578 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 C4orf45Q96LM5 186 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 ATF6BQ99941 703 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 RNPEPL1Q9HAU8 725 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 CBLN4Q9NTU7 201 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 FAM118AQ9NWS6 357 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 IMPAD1Q9NX62 359 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 SMPD3Q9NY59 655 aaPredicted RBP12.99□□□□□ -0.33
CD9-210ENST00000543916 DNAJC27Q9NZQ0 273 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 FZR1Q9UM11 496 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 GMPPBQ9Y5P6 360 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 PLCE1Q9P212 2302 aa12.99□□□□□ -0.33
CD9-210ENST00000543916 TMEM129A0AVI4 362 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 H0YHG0 523 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 TMCC2O75069 709 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 ABHD16AO95870 558 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 NGFP01138 241 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 LCKP06239 509 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 MRPL3P09001 348 aaKnown RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 CDKN1AP38936 164 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 RAD52P43351 418 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 RPS23P62266 143 aaKnown RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 SLC34A1Q06495 639 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 EFNB3Q15768 340 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 SWI5Q1ZZU3 235 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 KRTAP27-1Q3LI81 207 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 LCN1P1Q5VSP4 162 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 LRP11Q86VZ4 500 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 GID4Q8IVV7 300 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 OR1J1Q8NGS3 322 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 MRPL24Q96A35 216 aaKnown RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 RDH12Q96NR8 316 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 AMELYQ99218 206 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 ABHD6Q9BV23 337 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 MRPL37Q9BZE1 423 aaKnown RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 BCL2L14Q9BZR8 327 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 C8orf4Q9NR00 106 aa12.98□□□□□ -0.33
CD9-210ENST00000543916 DDX28Q9NUL7 540 aaKnown RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 EIF3KQ9UBQ5 218 aaKnown RBP12.98□□□□□ -0.33
CD9-210ENST00000543916 GRIP1Q9Y3R0 1128 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms