RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SLC22A9Q8IVM8 553 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 OR5AS1Q8N127 324 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PNKDQ8N490 385 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 ANKFN1Q8N957 763 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PNLDC1Q8NA58 520 aaKnown RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 WFDC9Q8NEX5 89 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 AKR7LQ8NHP1 331 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 RORBQ92753 470 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 TFAP2CQ92754 450 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 DACT3Q96B18 629 aaPredicted RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 L3HYPDHQ96EM0 354 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF764Q96H86 408 aaPredicted RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MAGEB18Q96M61 343 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 C1orf50Q9BV19 199 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 DUSP26Q9BV47 211 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MECRQ9BV79 373 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PTDSS2Q9BVG9 487 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 MEAF6Q9HAF1 191 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 GCM1Q9NP62 436 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 CCNB1IP1Q9NPC3 277 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 TCF7L2Q9NQB0 619 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 POLE3Q9NRF9 147 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 ZNRD1Q9P1U0 126 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 SLC17A7Q9P2U7 560 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 ONECUT1Q9UBC0 465 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 NKX1-2Q9UD57 310 aaPredicted RBP3.91□□□□□ -1.78
LIMS1-214ENST00000542845 IL19Q9UHD0 177 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 SNX12Q9UMY4 172 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PLA2G2DQ9UNK4 145 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 PPP2R2CQ9Y2T4 447 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 CCL27Q9Y4X3 112 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 DNAH1Q9P2D7 4330 aa3.91□□□□□ -1.78
LIMS1-214ENST00000542845 SACSQ9NZJ4 4579 aa3.9□□□□□ -1.78
LIMS1-214ENST00000542845 LOC100509620A0A075B734 347 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 A0A087WUJ7 227 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 A0A096LPI6 279 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ELOVL7A1L3X0 281 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 MEIOCA2RUB1 952 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 LRRC30A6NM36 301 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 TMEM114B3SHH9 223 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 FAAHO00519 579 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 PHYHO14832 338 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 LSM1O15116 133 aaKnown RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ANGPTL7O43827 346 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 OR2T1O43869 369 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 FZD7O75084 574 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ENTPD5O75356 428 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 CHEK2O96017 543 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 C1QCP02747 245 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 CSTBP04080 98 aaKnown RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 LIPFP07098 398 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 DBIP07108 87 aaKnown RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 QDPRP09417 244 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 NR2F1P10589 423 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 IRF2P14316 349 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF26P17031 533 aaPredicted RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 EEF1B2P24534 225 aaKnown RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 PAX6P26367 422 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ARRB2P32121 409 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 PHBP35232 272 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 HTR5AP47898 357 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ARHGDIAP52565 204 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SRSF3P84103 164 aaKnown RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 HOXA4Q00056 320 aaPredicted RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 EGR4Q05215 589 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 KLRD1Q13241 179 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 MELKQ14680 651 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 PTGR1Q14914 329 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SGCAQ16586 387 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF404Q494X3 552 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 CEP85LQ5SZL2 805 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 FAM69AQ5T7M9 428 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 IL23RQ5VWK5 629 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SFRP4Q6FHJ7 346 aaPredicted RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 C1orf94Q6P1W5 598 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 C11orf88Q6PI97 169 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 UNQ9370/PRO34162Q6UXP9 181 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF841Q6ZN19 808 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 Q6ZR03 302 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 CCDC121Q6ZUS5 278 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 RFPL4BQ6ZWI9 263 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ZER1Q7Z7L7 766 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 COMTD1Q86VU5 262 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ANKRD46Q86W74 232 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ZNF440Q8IYI8 595 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 OR10AD1Q8NGE0 317 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 OR52P1PQ8NH57 321 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 OR5R1Q8NH85 324 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 PSMA8Q8TAA3 256 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 FBXO25Q8TCJ0 367 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 STON2Q8WXE9 905 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SLC38A4Q969I6 547 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 CMBLQ96DG6 245 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 METTL2AQ96IZ6 378 aaKnown RBP3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SSX3Q99909 188 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 ERP44Q9BS26 406 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 KRTAP4-5Q9BYR2 181 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SIRPDQ9H106 197 aa3.9□□□□□ -1.79
LIMS1-214ENST00000542845 SLC38A1Q9H2H9 487 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms