RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GPR107Q5VW38 600 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 PDPK2PQ6A1A2 396 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SPOPLQ6IQ16 392 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 NIPAL1Q6NVV3 410 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 DHRS4L2Q6PKH6 230 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 C4orf22Q6V702 233 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM122BQ7Z309 247 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 APRG1Q8IVJ8 170 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 NRMQ8IXM6 262 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ST13P4Q8IZP2 240 aaPredicted RBP3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC39A11Q8N1S5 342 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 LIX1Q8N485 282 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 NATD1Q8N6N6 113 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF614Q8N883 585 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 C4orf32Q8N8J7 132 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FNDC5Q8NAU1 212 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 Q8NBF4 154 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FBXO36Q8NEA4 188 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 OR10Z1Q8NGY1 313 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 OR4Q3Q8NH05 313 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 LYPD6BQ8NI32 183 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ENKURQ8TC29 256 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RASSF5Q8WWW0 418 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CMTM7Q96FZ5 175 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC45A3Q96JT2 553 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CSPG4P5Q96PW8 444 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 TSG101Q99816 390 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 KCNS3Q9BQ31 491 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM246Q9BRR3 403 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 TRIM51Q9BSJ1 452 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ELOVL4Q9GZR5 314 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RANBP3Q9H6Z4 567 aaPredicted RBP3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SPACA1Q9HBV2 294 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ZC4H2Q9NQZ6 224 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FGFR1OP2Q9NVK5 253 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 TAS2R7Q9NYW3 318 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 UXTQ9UBK9 157 aaPredicted RBP3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 FLVCR2Q9UPI3 526 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC17A4Q9Y2C5 497 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 ZDBF2Q9HCK1 2354 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 MYO3BQ8WXR4 1341 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 CACNA1IQ9P0X4 2223 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 SPEF2Q9C093 1822 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 NID2Q14112 1375 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 RTL9Q8NET4 1388 aa3.12□□□□□ -1.91
SFSWAP-211ENST00000542813 COL1A1P02452 1464 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 COL2A1P02458 1487 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SIPA1L3O60292 1781 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 GOLGA8QA0A0J9YX86 632 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 FUOMA2VDF0 154 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 PRSS37A4D1T9 235 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 GOLGA8JA6NMD2 632 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 MIF4GDA9UHW6 222 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM220BPB1ANY3 271 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NR5A2O00482 541 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ZBTB5O15062 677 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 BET1O15155 118 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NDUFA2O43678 99 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 EIF4E2O60573 245 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 HSBP1O75506 76 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ATP5HO75947 161 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 KRT75O95678 551 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 HLA-DRAP01903 254 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 RETP07949 1114 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 LAMP1P11279 417 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 CCL2P13500 99 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 MGMTP16455 207 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 HOXB8P17481 243 aaPredicted RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 PMCHP20382 165 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 IGHV1-2P23083 117 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 LCN1P31025 176 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 GTF2H1P32780 548 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SHMT2P34897 504 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NUDT1P36639 197 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 CFHR2P36980 270 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NPBWR2P48146 333 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 HSPA13P48723 471 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 MAP3K7CLP57077 242 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 RPL26P61254 145 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ATP6V0D1P61421 351 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ERVK11-1P61568 191 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 RPL32P62910 135 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 TNNC1P63316 161 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ARL6IP1Q15041 203 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SF3A2Q15428 464 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NSUN5P1Q3KNT7 163 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 PARP15Q460N3 678 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 CLVS2Q5SYC1 327 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 TRIM40Q6P9F5 258 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 IDO2Q6ZQW0 420 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 ACOT7LQ6ZUV0 252 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 TMUB2Q71RG4 321 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 GDPD3Q7L5L3 318 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 TIPARPQ7Z3E1 657 aaKnown RBP3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 NKAIN4Q8IVV8 208 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 CMTM1Q8IZ96 169 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 FTMTQ8N4E7 242 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 EID2Q8N6I1 236 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 OR2G2Q8NGZ5 317 aa3.11□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC7A13Q8TCU3 470 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms