RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MTFR2Q6P444 385 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 RHOUQ7L0Q8 258 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 GCDHQ92947 438 aaPredicted RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 ZNF385AQ96PM9 386 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 C7orf50Q9BRJ6 194 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 TMEM9BQ9NQ34 198 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 CENPMQ9NSP4 180 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 A0A0C4DFX4 3053 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 KIAA1549Q9HCM3 1950 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 IGHV3-15A0A0B4J1V0 119 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 A0A1B0GTI1 187 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 LOC390937A0A1W2PQ73 354 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 INMT-MINDY4F8WBC2 141 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 P2RY10O00398 339 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 EIF1AYO14602 144 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 SMAD9O15198 467 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 DOK2O60496 412 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 VAMP5O95183 116 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 ANOS1P23352 680 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 GDNFP39905 211 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 TMEM244Q5VVB8 128 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 SUMF1Q8NBK3 374 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 OR51A2Q8NGJ7 313 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 S100A16Q96FQ6 103 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 ADGRG7Q96K78 797 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 OR2B2Q9GZK3 357 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 GLTPQ9NZD2 209 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 FOXD3Q9UJU5 478 aaPredicted RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 POU2F3Q9UKI9 436 aa12.55□□□□□ -0.4
LDB3-207ENST00000542786 MRPS18CQ9Y3D5 142 aaKnown RBP12.55□□□□□ -0.4
LDB3-207ENST00000542786 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 CIB4A0PJX0 185 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 ZNF726A6NNF4 738 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 TNFSF11O14788 317 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 LDLRAD4O15165 306 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 DLSTP36957 453 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 EIF1AXP47813 144 aaKnown RBP12.54□□□□□ -0.4
LDB3-207ENST00000542786 NKX2-5P52952 324 aaPredicted RBP12.54□□□□□ -0.4
LDB3-207ENST00000542786 TAS2R20P59543 309 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
LDB3-207ENST00000542786 RAB11BQ15907 218 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 HES3Q5TGS1 186 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 ZNF529Q6P280 563 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 ANKRD16Q6P6B7 361 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 DHRS13Q6UX07 377 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 KRT74Q7RTS7 529 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 YRDCQ86U90 279 aaKnown RBP12.54□□□□□ -0.4
LDB3-207ENST00000542786 TOMM5Q8N4H5 51 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 OR51D1Q8NGF3 324 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 OR13C3Q8NGS6 347 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 NABP1Q96AH0 204 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 RNF170Q96K19 258 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 PBOV1Q9GZY1 135 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 KCNK15Q9H427 330 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 ZNF221Q9UK13 617 aa12.54□□□□□ -0.4
LDB3-207ENST00000542786 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
LDB3-207ENST00000542786 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 C7orf66A4D0T2 115 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 XRCC3O43542 346 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 CD2P06729 351 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 ARSBP15848 533 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 ENPP1P22413 925 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 POU3F4P49335 361 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 C1orf100Q5SVJ3 147 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 TMEM69Q5SWH9 247 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 JMJD6Q6NYC1 403 aaPredicted RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 KCNE4Q8WWG9 221 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 FAM3DQ96BQ1 224 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 NAA11Q9BSU3 229 aaPredicted RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 FAM117AQ9C073 453 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 SEC61A2Q9H9S3 476 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 ZNF275Q9NSD4 429 aaPredicted RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 ASH2LQ9UBL3 628 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 N6AMT1Q9Y5N5 214 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 AHCTF1Q8WYP5 2266 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 LOC100289279A0A1B0GTE1 492 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 GJE1A6NN92 205 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.53□□□□□ -0.4
LDB3-207ENST00000542786 RER1O15258 196 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 CTAG2O75638 210 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 KRT33AO76009 404 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 PTHLHP12272 177 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 CTSSP25774 331 aa12.53□□□□□ -0.4
LDB3-207ENST00000542786 CSNK1A1P48729 337 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms