RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 TUBG2Q9NRH3 451 aa14.86□□□□□ -0.03
CLSTN3-214ENST00000542663 MIOXQ9UGB7 285 aa14.86□□□□□ -0.03
CLSTN3-214ENST00000542663 RIMS3Q9UJD0 308 aa14.86□□□□□ -0.03
CLSTN3-214ENST00000542663 SH3GLB1Q9Y371 365 aa14.86□□□□□ -0.03
CLSTN3-214ENST00000542663 CLPSL1A2RUU4 121 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 DOK2O60496 412 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 GZMMP51124 257 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 TAS2R41P59536 307 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 PIN1Q13526 163 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 SLC27A4Q6P1M0 643 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 CCDC80Q76M96 950 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 IGFN1Q86VF2 1251 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 OR5AS1Q8N127 324 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 LRRC75AQ8NAA5 344 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 OR10AD1Q8NGE0 317 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 FNDC8Q8TC99 324 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 SLC7A6Q92536 515 aa14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 NEIL1Q96FI4 390 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 RBM4BQ9BQ04 359 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 NUDT16L1Q9BRJ7 211 aaKnown RBP14.85□□□□□ -0.03
CLSTN3-214ENST00000542663 C12orf71A8MTZ7 269 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 H0YL77 283 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 IFNL4K9M1U5 179 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 TIMM23O14925 209 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 OR5F1O95221 314 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 CRYBA1P05813 215 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 SELEP16581 610 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 HTR5AP47898 357 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 FGF12P61328 243 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 GUCY1A3Q02108 690 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 FHL1Q13642 323 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 HLXQ14774 488 aaPredicted RBP14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 VMACQ2NL98 169 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 ZNF404Q494X3 552 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 FAM201AQ5SY85 155 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 INTS11Q5TA45 600 aaKnown RBP14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 FAM205BPQ63HN1 556 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 RUSC1-AS1Q66K80 236 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 VASH1Q7L8A9 365 aaPredicted RBP14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 OR10A6Q8NH74 314 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 RASSF5Q8WWW0 418 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 PTP4A1Q93096 173 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 TLCD1Q96CP7 247 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 MEGF10Q96KG7 1140 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 CDADC1Q9BWV3 514 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 NOX4Q9NPH5 578 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 MED31Q9Y3C7 131 aa14.84□□□□□ -0.03
CLSTN3-214ENST00000542663 H7C1C5 153 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 MLNRO43193 412 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 SGCEO43556 437 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 MELTFP08582 738 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 VIMP08670 466 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 FUT4P22083 530 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 GUCA1AP43080 201 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 CTXN1P60606 82 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 LCN6P62502 163 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 LYPD2Q6UXB3 125 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 C1QL4Q86Z23 238 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 ATG16L2Q8NAA4 619 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 PLEKHA8Q96JA3 519 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 POLR2J2Q9GZM3 115 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 POLR2J3Q9H1A7 115 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 RAB21Q9UL25 225 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 NDUFAF1Q9Y375 327 aa14.83□□□□□ -0.04
CLSTN3-214ENST00000542663 TET2Q6N021 2002 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 IGHV3-64DA0A0J9YX35 117 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 FSTL3O95633 263 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 RAC2P15153 192 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 PMELP40967 661 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 OR1E2P47887 323 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 PITPNBP48739 271 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 BPIFB3P59826 476 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 SCRN3Q0VDG4 424 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 ZNF181Q2M3W8 571 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 GPR157Q5UAW9 335 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 C1orf94Q6P1W5 598 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 ZNF841Q6ZN19 808 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 MOGAT3Q86VF5 341 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 TMEM86BQ8N661 226 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 OR8G5Q8NG78 346 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 OR8B3Q8NGG8 313 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 BPIFA2Q96DR5 249 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 OR8B2Q96RD0 313 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 WACQ9BTA9 647 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 RNF114Q9Y508 228 aa14.82□□□□□ -0.04
CLSTN3-214ENST00000542663 TRAV27A0A087WT01 109 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 C22orf46C9J442 243 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 TSPAN15O95858 294 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 SFTPBP07988 381 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 IFI30P13284 250 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 TAF9Q16594 264 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 OTPQ5XKR4 325 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 WDR25Q64LD2 544 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 HIST2H2BDQ6DRA6 164 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 OR2T2Q6IF00 324 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 FBXW12Q6X9E4 464 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 MICU2Q8IYU8 434 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 OR13G1Q8NGZ3 307 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 LINC01006Q8NI28 216 aa14.81□□□□□ -0.04
CLSTN3-214ENST00000542663 LRRC8CQ8TDW0 803 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms