RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 C12orf71A8MTZ7 269 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 SGCEO43556 437 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 EDF1O60869 148 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 GSTM3P21266 225 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 PMELP40967 661 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 SLC9A3P48764 834 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 PRKCDQ05655 676 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 CCDC92Q53HC0 331 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 ESCO2Q56NI9 601 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 OR2T2Q6IF00 324 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 UNQ6126/PRO20091Q6UXV3 157 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 FAM122BQ7Z309 247 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 SYT9Q86SS6 491 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 NPEPL1Q8NDH3 523 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 OR8J3Q8NGG0 315 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 OR52E2Q8NGJ4 325 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 RASD2Q96D21 266 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 HAVCR1Q96D42 359 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 MAGEB18Q96M61 343 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 MS4A7Q9GZW8 240 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 TMEM165Q9HC07 324 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 INTS9Q9NV88 658 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 PTTG3PQ9NZH4 202 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 OR5V1Q9UGF6 321 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 WNK1Q9H4A3 2382 aa12.93□□□□□ -0.34
CLSTN3-213ENST00000541953 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 A0A087WUU8 490 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 OR6C6A6NF89 314 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 EFCAB9A8MZ26 197 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 CLDN34H7C241 214 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 MRASO14807 208 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 COX5BP10606 129 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 NR2C1P13056 603 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 TNFRSF1AP19438 455 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 KDELR2P33947 212 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 RELBQ01201 579 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 ST3GAL3Q11203 375 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 C9orf139Q6ZV77 190 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 SPATC1Q76KD6 591 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 TSEN54Q7Z6J9 526 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 OAFQ86UD1 273 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 C1orf174Q8IYL3 243 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 OFCC1Q8IZS5 231 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 C19orf18Q8NEA5 215 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 SLC25A28Q96A46 364 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 UPRTQ96BW1 309 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 GPA33Q99795 319 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 TMEM246Q9BRR3 403 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 CDADC1Q9BWV3 514 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 SSBP3Q9BWW4 388 aaPredicted RBP12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 TMEM120AQ9BXJ8 343 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 WDR76Q9H967 626 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 ZMAT3Q9HA38 289 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 ASH2LQ9UBL3 628 aa12.92□□□□□ -0.34
CLSTN3-213ENST00000541953 A6NIZ1 184 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 FAM220BPB1ANY3 271 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 F5H5P2 479 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 RER1O15258 196 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 HOXA3O43365 443 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 RPS2P15880 293 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 ANOS1P23352 680 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 TNFSF4P23510 183 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 RAP1BP61224 184 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 RAP1AP62834 184 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 IL13RA1P78552 427 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 SCRN3Q0VDG4 424 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 DEFB112Q30KQ8 113 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 MIDNQ504T8 468 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 FAM205BPQ63HN1 556 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 RUSC1-AS1Q66K80 236 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 LYPD2Q6UXB3 125 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 ZER1Q7Z7L7 766 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 MOGAT3Q86VF5 341 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 BHLHE23Q8NDY6 225 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 TMIGD2Q96BF3 282 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 TNFRSF19Q9NS68 423 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 PDP1Q9P0J1 537 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 LRCH1Q9Y2L9 728 aa12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 COA3Q9Y2R0 106 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-213ENST00000541953 TEX13CA0A0J9YWL9 993 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 PRSS37A4D1T9 235 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 C22orf46C9J442 243 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 CD14P08571 375 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 KRTAP10-3P60369 221 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 SELENOWP63302 87 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 GUCY1A3Q02108 690 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 KLF10Q13118 480 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 MEP1BQ16820 701 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 RSPO1Q2MKA7 263 aaPredicted RBP12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 CGB2Q6NT52 195 aa12.9□□□□□ -0.34
CLSTN3-213ENST00000541953 ERICH5Q6P6B1 374 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms