RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 ULBP2Q9BZM5 246 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 LAT2Q9GZY6 243 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 PPA2Q9H2U2 334 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 SPTAN1Q13813 2472 aaKnown RBP13.1□□□□□ -0.31
GCFC2-211ENST00000541687 EIF4E2O60573 245 aaKnown RBP13.1□□□□□ -0.31
GCFC2-211ENST00000541687 BLVRBP30043 206 aaPredicted RBP13.1□□□□□ -0.31
GCFC2-211ENST00000541687 NUDT1P36639 197 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 FBXO4Q9UKT5 387 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 ZNF175Q9Y473 711 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 IGKV1D-16P01601 117 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 FCGR2AP12318 317 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
GCFC2-211ENST00000541687 BATFQ16520 125 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 RRNAD1Q96FB5 475 aaKnown RBP13.1□□□□□ -0.31
GCFC2-211ENST00000541687 VSTM2LQ96N03 204 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 GABRG3Q99928 467 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
GCFC2-211ENST00000541687 A0A0U1RQK1 487 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 RECKO95980 971 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 RAB4BP61018 213 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 AKR1C8PQ5T2L2 129 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SLC22A24Q8N4F4 322 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 NPEPL1Q8NDH3 523 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 TUBG2Q9NRH3 451 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SDHAF2Q9NX18 166 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SF3B6Q9Y3B4 125 aaKnown RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 CBR1P16152 277 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 MSX1P28360 303 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 DCDP81605 110 aaKnown RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 OR11H7Q8NGC8 314 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 OR4D6Q8NGJ1 314 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SLAMF9Q96A28 289 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 WDR89Q96FK6 387 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 CFHR5Q9BXR6 569 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 TINAGL1Q9GZM7 467 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 PRMT8Q9NR22 394 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 H0YIG0 161 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 LPLP06858 475 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SELENOPP49908 381 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 CYCSP99999 105 aaKnown RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 CLVS2Q5SYC1 327 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 OR51A4Q8NGJ6 313 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 FRZBQ92765 325 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 CCDC74AQ96AQ1 378 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SLAMF6Q96DU3 332 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 TSPAN32Q96QS1 320 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 LDAHQ9H6V9 325 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 LRFN1Q9P244 771 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 ZSWIM8A7E2V4 1837 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 TSC2P49815 1807 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SDCBPO00560 298 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 OIP5O43482 229 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SLC34A2O95436 690 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 FASLGP48023 281 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 GABREP78334 506 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 CDONQ4KMG0 1287 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 NPSR1Q6W5P4 371 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 FJX1Q86VR8 437 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 PRR18Q8N4B5 295 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 ZSCAN4Q8NAM6 433 aaPredicted RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 SNIP1Q8TAD8 396 aaKnown RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 LRFN5Q96NI6 719 aa13.09□□□□□ -0.31
GCFC2-211ENST00000541687 MRM2Q9UI43 246 aaKnown RBP13.09□□□□□ -0.31
GCFC2-211ENST00000541687 A0A1B0GUH1 482 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 SGCEO43556 437 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 ALOX12BO75342 701 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 THY1P04216 161 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 DBHP09172 617 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 TMIGD3P0DMS9 266 aaPredicted RBP13.08□□□□□ -0.32
GCFC2-211ENST00000541687 ABCD3P28288 659 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 RBM39Q14498 530 aaKnown RBP13.08□□□□□ -0.32
GCFC2-211ENST00000541687 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 LYSMD4Q5XG99 296 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 OTOSQ8NHW6 89 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 CHRDQ9H2X0 955 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 DLL4Q9NR61 685 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 FOXJ3Q9UPW0 622 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 DOPEY2Q9Y3R5 2298 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
GCFC2-211ENST00000541687 GNB3P16520 340 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 EPHA1P21709 976 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 GALP22466 123 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 CASRP41180 1078 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 AKAP6Q13023 2319 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 B3GNTL1Q67FW5 361 aaPredicted RBP13.08□□□□□ -0.32
GCFC2-211ENST00000541687 OR52N5Q8NH56 324 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 SPTSSAQ969W0 71 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 CMBLQ96DG6 245 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 MED30Q96HR3 178 aa13.08□□□□□ -0.32
GCFC2-211ENST00000541687 C1QTNF6Q9BXI9 259 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms