RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ABHD13Q7L211 337 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 PIWIL4Q7Z3Z4 852 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 MRGPREQ86SM8 312 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 LINC01561Q8N1V8 128 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 IQCF1Q8N6M8 205 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 TPRX1Q8N7U7 411 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ZSCAN4Q8NAM6 433 aaPredicted RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 CATSPER1Q8NEC5 780 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 NOXO1Q8NFA2 376 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 OR4F17Q8NGA8 305 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 OR2D3Q8NGH3 330 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 OR2Y1Q8NGV0 311 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 OR4F5Q8NH21 305 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 CDS1Q92903 461 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.72□□□□□ -1.654e-11■■■■■ 51
DDB1-219ENST00000541513 ELSPBP1Q96BH3 223 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 NTNG2Q96CW9 530 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 OMA1Q96E52 524 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ZBED6CLQ96FA7 236 aaPredicted RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 RNF145Q96MT1 663 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 OR4F4Q96R69 305 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 LPAR4Q99677 370 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ZYG11BQ9C0D3 744 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 ACTR3CQ9C0K3 210 aaPredicted RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 HOXD1Q9GZZ0 328 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 SHARPINQ9H0F6 387 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 GLIPR2Q9H4G4 154 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 PATZ1Q9HBE1 687 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 MYOZ1Q9NP98 299 aaPredicted RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 THUMPD1Q9NXG2 353 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 ICAM5Q9UMF0 924 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 YARS2Q9Y2Z4 477 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 TBL2Q9Y4P3 447 aaKnown RBP4.72□□□□□ -1.65
DDB1-219ENST00000541513 OARD1Q9Y530 152 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 VCANP13611 3396 aa4.72□□□□□ -1.65
DDB1-219ENST00000541513 COL4A3Q01955 1670 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 A0A087WZ39 114 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 A0A087X0T9 212 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 hDV102S1A0JD36 115 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 SIGLEC16A6NMB1 481 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 PATE3B3GLJ2 98 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 F8W036 122 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 EI24O14681 340 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 TNFSF11O14788 317 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 RAMP1O60894 148 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ANGPTL1O95841 491 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 TSPAN15O95858 294 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 IGLV3-25P01717 112 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 NGFRP08138 427 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 FAM228BP0C875 321 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 RD3LP0DJH9 198 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ZNF7P17097 686 aaPredicted RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 EFNA1P20827 205 aaPredicted RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 CA6P23280 308 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 RPL4P36578 427 aaKnown RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 NBL1P41271 181 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 YAP1P46937 504 aaKnown RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 CSNK1A1P48729 337 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 DNASE1L1P49184 302 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 PRLHRP49683 370 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ERFP50548 548 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 GAS1P54826 345 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 DCDC1P59894 354 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 RPS15AP62244 130 aaKnown RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 RPS13P62277 151 aaKnown RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 EIF4EBP2Q13542 120 aaPredicted RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 DUSP5Q16690 384 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 PRTGQ2VWP7 1150 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 FAM78AQ5JUQ0 283 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 DNAJC24Q6P3W2 148 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 C5orf46Q6UWT4 87 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 CBLL1Q75N03 491 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 HORMAD1Q86X24 394 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 OR2L13Q8N349 312 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ATP6V0D2Q8N8Y2 350 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 OR4Q3Q8NH05 313 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 LYPD6BQ8NI32 183 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ACTL9Q8TC94 416 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 RASSF5Q8WWW0 418 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 NDRG1Q92597 394 aaKnown RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 FGF14Q92915 247 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 APH1AQ96BI3 265 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 RTP4Q96DX8 246 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 CCDC126Q96EE4 140 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ZNF670Q9BS34 389 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 SLC35A5Q9BS91 424 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 TIMM29Q9BSF4 260 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 DUSP26Q9BV47 211 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 ALX4Q9H161 411 aaPredicted RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 METTL9Q9H1A3 318 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 MMP28Q9H239 520 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 FZD3Q9NPG1 666 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 SIRT7Q9NRC8 400 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 FOXJ2Q9P0K8 574 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 C19orf25Q9UFG5 118 aaPredicted RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 STOML2Q9UJZ1 356 aa4.71□□□□□ -1.66
DDB1-219ENST00000541513 AGO1Q9UL18 857 aaKnown RBP4.71□□□□□ -1.66
DDB1-219ENST00000541513 ACOT9Q9Y305 439 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms