RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 DCKP27707 260 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 MAP2K4P45985 399 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 RAB1AP62820 205 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 PSG4Q00888 419 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 TFF3Q07654 80 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 AQP6Q13520 282 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 DOC2BQ14184 412 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 FBXL19-AS1Q494R0 122 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 NRN1LQ496H8 165 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 OR7E24Q6IFN5 339 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 ZNF774Q6NX45 483 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 XKRXQ6PP77 449 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 MDP1Q86V88 176 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 ACBD7Q8N6N7 88 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 C1orf162Q8NEQ5 155 aaPredicted RBP8.14□□□□□ -1.11
DDX55-208ENST00000541259 OR2AJ1Q8NGZ0 328 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 OR2T27Q8NH04 317 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 AKR7LQ8NHP1 331 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 THEM6Q8WUY1 208 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 IPCEF1Q8WWN9 437 aaPredicted RBP8.14□□□□□ -1.11
DDX55-208ENST00000541259 RNASE6Q93091 150 aaKnown RBP8.14□□□□□ -1.11
DDX55-208ENST00000541259 MYDGFQ969H8 173 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 ZNF75AQ96N20 296 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 SIGLEC11Q96RL6 698 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 HDHD5Q9BXW7 423 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 OR2H1Q9GZK4 316 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 ACTR6Q9GZN1 396 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 CCDC90BQ9GZT6 254 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 WNT5BQ9H1J7 359 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 KCNN2Q9H2S1 579 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 RNF121Q9H920 327 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 CCNB1IP1Q9NPC3 277 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 PNRC2Q9NPJ4 139 aaKnown RBP8.14□□□□□ -1.11
DDX55-208ENST00000541259 ERVK13-1Q9NX77 482 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 SLCO1C1Q9NYB5 712 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 LAMP5Q9UJQ1 280 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 PCDHGB1Q9Y5G3 927 aa8.14□□□□□ -1.11
DDX55-208ENST00000541259 ARPC4-TTLL3A0A0A6YYG9 625 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 IRGMA1A4Y4 181 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 OR5H1A6NKK0 313 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 TMCC2O75069 709 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 TNFAIP8O95379 198 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 THBDP07204 575 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 AGAP20933 346 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 MAP2K3P46734 347 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 GABARAPL2P60520 117 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 UBE2NP61088 152 aaKnown RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 PCBD1P61457 104 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 IRF3Q14653 427 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 RAB39AQ14964 217 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 TAB1Q15750 504 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 RSPO1Q2MKA7 263 aaPredicted RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 SLC36A2Q495M3 483 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 KCTD21Q4G0X4 260 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 TP53I3Q53FA7 332 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 PABPC1L2AQ5JQF8 200 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 ZNF322Q6U7Q0 402 aaPredicted RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 LRRN1Q6UXK5 716 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 PLEKHG7Q6ZR37 379 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 MYPOPQ86VE0 399 aaPredicted RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 ZNF584Q8IVC4 421 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 CPEB3Q8NE35 698 aaKnown RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 GJC3Q8NFK1 279 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 STEAP2Q8NFT2 490 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 SLC7A6Q92536 515 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 SLAMF6Q96DU3 332 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 WFIKKN1Q96NZ8 548 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 ALG8Q9BVK2 526 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 JAM3Q9BX67 310 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 C1orf198Q9H425 327 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 ZNF696Q9H7X3 374 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 ISG20L2Q9H9L3 353 aaKnown RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 CENPMQ9NSP4 180 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 MRM2Q9UI43 246 aaKnown RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 BLOC1S6Q9UL45 172 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 EXOSC1Q9Y3B2 195 aaKnown RBP8.13□□□□□ -1.11
DDX55-208ENST00000541259 TIMM10BQ9Y5J6 103 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 SLC25A15Q9Y619 301 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 DOPEY1Q5JWR5 2465 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 ICE1Q9Y2F5 2266 aa8.13□□□□□ -1.11
DDX55-208ENST00000541259 SPTAN1Q13813 2472 aaKnown RBP8.12□□□□□ -1.11
DDX55-208ENST00000541259 ADGRG4Q8IZF6 3080 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 WIPF3A6NGB9 483 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 C19orf84I3L1E1 186 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 J3QKU1 62 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 SGCEO43556 437 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 SYNGR3O43761 229 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 DOK2O60496 412 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 UBL3O95164 117 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 CELA3BP08861 270 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 DBHP09172 617 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 APEX1P27695 318 aaKnown RBP8.12□□□□□ -1.11
DDX55-208ENST00000541259 ARR3P36575 388 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 OR12D2P58182 307 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 SCRN3Q0VDG4 424 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 GALEQ14376 348 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 GSG1Q2KHT4 349 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 ELFN2Q5R3F8 820 aa8.12□□□□□ -1.11
DDX55-208ENST00000541259 TIMM23BQ5SRD1 257 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms