RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 PRRG2O14669 202 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 B4GALT1P15291 398 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 CTSSP25774 331 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 MPGP29372 298 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 KIR2DL2P43627 348 aaPredicted RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 MMP16P51512 607 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 FAPQ12884 760 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 C1orf185Q5T7R7 199 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF813Q6ZN06 617 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 GCNT2Q8N0V5 402 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 KBTBD8Q8NFY9 601 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 FBXO17Q96EF6 278 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 HDHD5Q9BXW7 423 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 TP63Q9H3D4 680 aaPredicted RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF835Q9Y2P0 537 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 FAM215AQ9Y5M1 114 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 R4GMQ9 66 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ARHGAP21Q5T5U3 1957 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ARPC4-TTLL3A0A0A6YYG9 625 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 TMEM212A6NML5 194 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 GABRPO00591 440 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 LRRTM2O43300 516 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SRSF10O75494 262 aaKnown RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SC5DO75845 299 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ZFPL1O95159 310 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 WNT11O96014 354 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 GRB2P62993 217 aaKnown RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ARF1P84077 181 aaKnown RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SCRN3Q0VDG4 424 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SOWAHCQ53LP3 525 aaPredicted RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 YIF1BQ5BJH7 314 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 KLHL24Q6TFL4 600 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 GFRALQ6UXV0 394 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 TFAP2EQ6VUC0 442 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SEM1Q6ZVN7 128 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SPATC1Q76KD6 591 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ABHD4Q8TB40 342 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 HSD17B8Q92506 261 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 TRMT61AQ96FX7 289 aaKnown RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 PLSCR4Q9NRQ2 329 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 PRSS50Q9UI38 385 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF281Q9Y2X9 895 aa15.57■□□□□ 0.08
CLIP1-215ENST00000541108 SPENQ96T58 3664 aaKnown RBP15.57■□□□□ 0.08
CLIP1-215ENST00000541108 OR4C45A6NMZ5 311 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 ERVH48-1M5A8F1 160 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 RGS9O75916 674 aaPredicted RBP15.56■□□□□ 0.08
CLIP1-215ENST00000541108 IL2RAP01589 272 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 EDN3P14138 238 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF182P17025 639 aaPredicted RBP15.56■□□□□ 0.08
CLIP1-215ENST00000541108 PER3P56645 1201 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 ZNF829Q3KNS6 432 aaPredicted RBP15.56■□□□□ 0.08
CLIP1-215ENST00000541108 TMEM91Q6ZNR0 172 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 SLC16A14Q7RTX9 510 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 SKA3Q8IX90 412 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 OR5AK2Q8NH90 309 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 NDNFQ8TB73 568 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 C4orf45Q96LM5 186 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 KCTD7Q96MP8 289 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 SH3GL3Q99963 347 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 PDCD1LG2Q9BQ51 273 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 COMMD4Q9H0A8 199 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 DCSTAMPQ9H295 470 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 TIMM10BQ9Y5J6 103 aa15.56■□□□□ 0.08
CLIP1-215ENST00000541108 TLN1Q9Y490 2541 aaKnown RBP15.56■□□□□ 0.08
CLIP1-215ENST00000541108 ZZEF1O43149 2961 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 TMEM269A0A1B0GVZ9 245 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 GATBO75879 557 aaKnown RBP15.55■□□□□ 0.08
CLIP1-215ENST00000541108 PNPP00491 289 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 RBPJQ06330 500 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 ECH1Q13011 328 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 TAF13Q15543 124 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 ELFN2Q5R3F8 820 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 PAMR1Q6UXH9 720 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 Q6ZT83 130 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 CATSPERDQ86XM0 798 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 PRSS35Q8N3Z0 413 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 PHYHIPQ92561 330 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 ATF6BQ99941 703 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 DCUN1D5Q9BTE7 237 aa15.55■□□□□ 0.08
CLIP1-215ENST00000541108 TTLL8A6PVC2 850 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 SLC19A2O60779 497 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 TNFSF13O75888 250 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 TOXO94900 526 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 CD8BP10966 210 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 HSD11B1P28845 292 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 RPS11P62280 158 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLIP1-215ENST00000541108 SLC36A2Q495M3 483 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 CCDC92Q53HC0 331 aaPredicted RBP15.54■□□□□ 0.08
CLIP1-215ENST00000541108 WDR38Q5JTN6 314 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 C22orf42Q6IC83 251 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 ANKRD16Q6P6B7 361 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 DPPA2Q7Z7J5 298 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 DOLPP1Q86YN1 238 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 CNEP1R1Q8N9A8 125 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 DYNC2LI1Q8TCX1 351 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 KCNJ15Q99712 375 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 HDHD2Q9H0R4 259 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 RNF167Q9H6Y7 350 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 PLEK2Q9NYT0 353 aa15.54■□□□□ 0.08
CLIP1-215ENST00000541108 FBXL3Q9UKT7 428 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms