RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 NOX4Q9NPH5 578 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 PDP1Q9P0J1 537 aaPredicted RBP22.43■■□□□ 1.18
CHFR-218ENST00000540963 BAG5Q9UL15 447 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 SH3GLB1Q9Y371 365 aa22.43■■□□□ 1.18
CHFR-218ENST00000540963 IGHV3OR16-10A0A075B7F0 116 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 A0A0G2JND7 137 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 KIR2DS1A0A191URI9 304 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 FAM181BA6NEQ2 426 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 A6NIZ1 184 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 J3QW42 95 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 M0QZ24 198 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 RAG2P55895 527 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 RAP1BP61224 184 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 RAP1AP62834 184 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 SCRN3Q0VDG4 424 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 VMACQ2NL98 169 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 OLFML2AQ68BL7 652 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 TMEM86BQ8N661 226 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 PTP4A1Q93096 173 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 TMEM165Q9HC07 324 aa22.42■■□□□ 1.18
CHFR-218ENST00000540963 SOX21Q9Y651 276 aaPredicted RBP22.42■■□□□ 1.18
CHFR-218ENST00000540963 FXYD1O00168 92 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 TIMM23O14925 209 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 RAC2P15153 192 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 RBMXP38159 391 aaKnown RBP22.41■■□□□ 1.18
CHFR-218ENST00000540963 RPL15P61313 204 aaKnown RBP22.41■■□□□ 1.18
CHFR-218ENST00000540963 GUCY1A3Q02108 690 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 TOP3AQ13472 1001 aaPredicted RBP22.41■■□□□ 1.18
CHFR-218ENST00000540963 NFYCQ13952 458 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 ZNF181Q2M3W8 571 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 JAZF1Q86VZ6 243 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 KIR3DL3Q8N743 410 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 OR10A6Q8NH74 314 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 ZDHHC16Q969W1 377 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 NEIL1Q96FI4 390 aaPredicted RBP22.41■■□□□ 1.18
CHFR-218ENST00000540963 POFUT1Q9H488 388 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 POLE4Q9NR33 117 aa22.41■■□□□ 1.18
CHFR-218ENST00000540963 A0A1W2PPL8 197 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 ANGPT2O15123 496 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 DEFB112Q30KQ8 113 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 ANKDD1AQ495B1 522 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 METTL21CQ5VZV1 264 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 NANOGP8Q6NSW7 305 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 NLRC3Q7RTR2 1065 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 CLDN22Q8N7P3 220 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 OR10S1Q8NGN2 331 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 TMEM120AQ9BXJ8 343 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 STARD10Q9Y365 291 aa22.4■■□□□ 1.18
CHFR-218ENST00000540963 MDFIC2A0A1B0GVS7 189 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 CLPSL1A2RUU4 121 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 DOK2O60496 412 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 HTR5AP47898 357 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 PIN1Q13526 163 aaPredicted RBP22.39■■□□□ 1.17
CHFR-218ENST00000540963 RABL3Q5HYI8 236 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 Q6YL49 198 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 CALHM3Q86XJ0 350 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 CCT8L2Q96SF2 557 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 ZNF446Q9NWS9 450 aa22.39■■□□□ 1.17
CHFR-218ENST00000540963 SGCEO43556 437 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 SRP9P49458 86 aaKnown RBP22.38■■□□□ 1.17
CHFR-218ENST00000540963 CTXN1P60606 82 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 SF3A3Q12874 501 aaKnown RBP eCLIP22.38■■□□□ 1.17
CHFR-218ENST00000540963 GPR157Q5UAW9 335 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 BRICD5Q6PL45 260 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 ATG16L2Q8NAA4 619 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 LRRC75AQ8NAA5 344 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 PCYOX1LQ8NBM8 494 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 OR8B3Q8NGG8 313 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 OR13G1Q8NGZ3 307 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 BPIFA2Q96DR5 249 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 FAM71F1Q96KD3 344 aaPredicted RBP22.38■■□□□ 1.17
CHFR-218ENST00000540963 MEGF10Q96KG7 1140 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 OR8B2Q96RD0 313 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 SIKE1Q9BRV8 207 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 C1RLQ9NZP8 487 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 POMT1Q9Y6A1 747 aa22.38■■□□□ 1.17
CHFR-218ENST00000540963 AHCYL1O43865 530 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 SRSF4Q08170 494 aaKnown RBP22.37■■□□□ 1.17
CHFR-218ENST00000540963 PDCD1Q15116 288 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 ZNF404Q494X3 552 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 FIP1L1Q6UN15 594 aaKnown RBP22.37■■□□□ 1.17
CHFR-218ENST00000540963 FBXW12Q6X9E4 464 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 VASH1Q7L8A9 365 aaPredicted RBP22.37■■□□□ 1.17
CHFR-218ENST00000540963 C1orf87Q8N0U7 546 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 C10orf82Q8WW14 230 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 NUDT16L1Q9BRJ7 211 aaKnown RBP22.37■■□□□ 1.17
CHFR-218ENST00000540963 TMEM246Q9BRR3 403 aa22.37■■□□□ 1.17
CHFR-218ENST00000540963 LRRC30A6NM36 301 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 RGS6P49758 472 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 BRD3OSQ6XYD6 125 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 RHOUQ7L0Q8 258 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 FITM2Q8N6M3 262 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 OR8G5Q8NG78 346 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 OR5L1Q8NGL2 311 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 SLC30A2Q9BRI3 323 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 ARGLU1Q9NWB6 273 aaPredicted RBP22.36■■□□□ 1.17
CHFR-218ENST00000540963 ATPIF1Q9UII2 106 aa22.36■■□□□ 1.17
CHFR-218ENST00000540963 PHYHO14832 338 aa22.35■■□□□ 1.17
CHFR-218ENST00000540963 IFNA14P01570 189 aa22.35■■□□□ 1.17
CHFR-218ENST00000540963 SCG5P05408 212 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms