RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ZNF823P16415 610 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 ZNF23P17027 643 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 GRK5P34947 590 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 SLC25A1P53007 311 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 KLF3P57682 345 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 PPP1CBP62140 327 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 GINS1Q14691 196 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 KPNB1Q14974 876 aaKnown RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 CARTPTQ16568 116 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 NKPD1Q17RQ9 610 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 CCDC92Q53HC0 331 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 TMEM236Q5W0B7 351 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 SLC18B1Q6NT16 456 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 ACSM5Q6NUN0 579 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 TMEM154Q6P9G4 183 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 LYPD4Q6UWN0 246 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 CFAP77Q6ZQR2 320 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 RFPL4BQ6ZWI9 263 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 HIPK1Q86Z02 1210 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 ZDHHC13Q8IUH4 622 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 MAPK1IP1LQ8NDC0 245 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 GJC3Q8NFK1 279 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 OR6K6Q8NGW6 343 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 OR2AJ1Q8NGZ0 328 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 OR1F12Q8NHA8 337 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 SYNPRQ8TBG9 265 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 ZNRF4Q8WWF5 429 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 PYDC1Q8WXC3 89 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 SLC7A6Q92536 515 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 FAM168AQ92567 244 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 DUS3LQ96G46 650 aaKnown RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 COX4I2Q96KJ9 171 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 PITX2Q99697 317 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 REG4Q9BYZ8 158 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 HEATR1Q9H583 2144 aaKnown RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 MED20Q9H944 212 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 ELOVL3Q9HB03 270 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 PAPOLBQ9NRJ5 636 aaKnown RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 CMC2Q9NRP2 79 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 MRPL22Q9NWU5 206 aaKnown RBP7.92□□□□□ -1.14
SNHG1-215ENST00000540904 TAAR3PQ9P1P4 343 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 GRIP1Q9Y3R0 1128 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 HIVEP1P15822 2718 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 AKAP9Q99996 3911 aa7.92□□□□□ -1.14
SNHG1-215ENST00000540904 PLCE1Q9P212 2302 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 ITPR3Q14573 2671 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 OR6C6A6NF89 314 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 HMGN1P05114 100 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 DBHP09172 617 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 NAT2P11245 290 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 SPI1P17947 270 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 PAICSP22234 425 aaKnown RBP7.91□□□□□ -1.14
SNHG1-215ENST00000540904 GCH1P30793 250 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 FMO3P31513 532 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 GGT2P36268 569 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 MPV17P39210 176 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 RPS27P42677 84 aaKnown RBP7.91□□□□□ -1.14
SNHG1-215ENST00000540904 DAPP51397 102 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 DSCR9P59020 149 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 ACTR3P61158 418 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 CDK5Q00535 292 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 ZNF718Q3SXZ3 478 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 ELFN2Q5R3F8 820 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 FAHD1Q6P587 224 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 DNM1P46Q6ZS02 220 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 ZNF511Q8NB15 262 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 SLC25A40Q8TBP6 338 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 KLF14Q8TD94 323 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-215ENST00000540904 DNAJC9Q8WXX5 260 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 MARS2Q96GW9 593 aaKnown RBP7.91□□□□□ -1.14
SNHG1-215ENST00000540904 HCAR1Q9BXC0 346 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 TEX12Q9BXU0 123 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 NMNAT2Q9BZQ4 307 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 OR2J1Q9GZK6 312 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 HDHD2Q9H0R4 259 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 OR51V1Q9H2C8 321 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 SEMA6AQ9H2E6 1030 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 GSX1Q9H4S2 264 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-215ENST00000540904 WDR76Q9H967 626 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 KRT84Q9NSB2 600 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-215ENST00000540904 CYB5R1Q9UHQ9 305 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 GPR160Q9UJ42 338 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 KCNG2Q9UJ96 466 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 COMMD3-BMI1R4GMX3 469 aa7.91□□□□□ -1.14
SNHG1-215ENST00000540904 IGLV3-9A0A075B6K5 115 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 SAC3D1A6NKF1 404 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 PRR23D1E9PI22 279 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 F5H5K5 113 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 SURF4O15260 269 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 ICMTO60725 284 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 MITFO75030 526 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 SPARCP09486 303 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 CSF3P09919 207 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 PRR23D2P0DMB1 279 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-215ENST00000540904 DAOP14920 347 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 CRISP1P54107 249 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 HIST1H3AP68431 136 aa7.9□□□□□ -1.14
SNHG1-215ENST00000540904 MOGQ16653 247 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms