RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MS4A5Q9H3V2 200 aa14.46□□□□□ -0.09
CD9-209ENST00000540891 TAAR3PQ9P1P4 343 aa14.46□□□□□ -0.09
CD9-209ENST00000540891 KLHL21Q9UJP4 597 aa14.46□□□□□ -0.09
CD9-209ENST00000540891 POLR1DQ9Y2S0 133 aa14.46□□□□□ -0.09
CD9-209ENST00000540891 CR1P17927 2039 aa14.46□□□□□ -0.1
CD9-209ENST00000540891 A0A1W2PPW3 197 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 VWC2LB2RUY7 222 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 DEAF1O75398 565 aaPredicted RBP14.45□□□□□ -0.1
CD9-209ENST00000540891 HEXAP06865 529 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 DBHP09172 617 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 CSF3P09919 207 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 CLUP10909 449 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 NAT2P11245 290 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 PSKH1P11801 424 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 OSMP13725 252 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 ANXA8P13928 327 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 GRK5P34947 590 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 SLC25A1P53007 311 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 KLF3P57682 345 aaPredicted RBP14.45□□□□□ -0.1
CD9-209ENST00000540891 PPP1CBP62140 327 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 ATP6AP1Q15904 470 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 ACSM5Q6NUN0 579 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 CFAP77Q6ZQR2 320 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 PROKR2Q8NFJ6 384 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 GJC3Q8NFK1 279 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 IPCEF1Q8WWN9 437 aaPredicted RBP14.45□□□□□ -0.1
CD9-209ENST00000540891 POFUT1Q9H488 388 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 PNRC2Q9NPJ4 139 aaKnown RBP14.45□□□□□ -0.1
CD9-209ENST00000540891 CMC2Q9NRP2 79 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 TBCCD1Q9NVR7 557 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 CYB5R1Q9UHQ9 305 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 ATPIF1Q9UII2 106 aa14.45□□□□□ -0.1
CD9-209ENST00000540891 TVP23AA6NH52 213 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 ABHD16AO95870 558 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 IGHV3-13P01766 116 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 HLA-DQA2P01906 255 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 GYPBP06028 91 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 DAOP14920 347 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 SLC25A16P16260 332 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 PDLIM4P50479 330 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 RSPO1Q2MKA7 263 aaPredicted RBP14.44□□□□□ -0.1
CD9-209ENST00000540891 KRTAP27-1Q3LI81 207 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 ELFN2Q5R3F8 820 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 LINC01590Q5TEZ4 76 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 MBNL2Q5VZF2 373 aaKnown RBP14.44□□□□□ -0.1
CD9-209ENST00000540891 FAHD1Q6P587 224 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 CCDC121Q6ZUS5 278 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 KLF14Q8TD94 323 aaPredicted RBP14.44□□□□□ -0.1
CD9-209ENST00000540891 GTF3AQ92664 365 aaKnown RBP14.44□□□□□ -0.1
CD9-209ENST00000540891 COQ7Q99807 217 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 HCAR1Q9BXC0 346 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 ELOVL3Q9HB03 270 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 MYOZ1Q9NP98 299 aaPredicted RBP14.44□□□□□ -0.1
CD9-209ENST00000540891 AP4S1Q9Y587 144 aa14.44□□□□□ -0.1
CD9-209ENST00000540891 LOC390937A0A1W2PQ73 354 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 FAM183AA6NL82 134 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 NCR1O76036 304 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 IFNGP01579 166 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 HPXP02790 462 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 SPI1P17947 270 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 POU1F1P28069 291 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 RPS27P42677 84 aaKnown RBP14.43□□□□□ -0.1
CD9-209ENST00000540891 DAPP51397 102 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 SELENOVP59797 346 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 CDK5Q00535 292 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 GINS1Q14691 196 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 NKPD1Q17RQ9 610 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 ZNF718Q3SXZ3 478 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 SLC27A4Q6P1M0 643 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 UNQ6126/PRO20091Q6UXV3 157 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 C1orf174Q8IYL3 243 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 ATG16L2Q8NAA4 619 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 ZNF511Q8NB15 262 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 OR5K1Q8NHB7 308 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 MAP6Q96JE9 813 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 HDHD2Q9H0R4 259 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 WDR76Q9H967 626 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 ZNF556Q9HAH1 456 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 HINT3Q9NQE9 182 aaKnown RBP14.43□□□□□ -0.1
CD9-209ENST00000540891 SLCO1C1Q9NYB5 712 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 KCNG2Q9UJ96 466 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 STARD10Q9Y365 291 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 GRIP1Q9Y3R0 1128 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 COMMD3-BMI1R4GMX3 469 aa14.43□□□□□ -0.1
CD9-209ENST00000540891 CHD3Q12873 2000 aaKnown RBP14.42□□□□□ -0.1
CD9-209ENST00000540891 RIIAD1A6NNX1 92 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 C17orf100A8MU93 164 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 LYNX1G3V0Z9 82 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 H3BSA7 217 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 NDUFS8O00217 210 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 CIB2O75838 187 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 ERCC1P07992 297 aaPredicted RBP14.42□□□□□ -0.1
CD9-209ENST00000540891 LYNX1P0DP58 116 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 ZNF3P17036 446 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 FASP25445 335 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 MAGEB1P43366 347 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 MMP15P51511 669 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 ARHGDIAP52565 204 aa14.42□□□□□ -0.1
CD9-209ENST00000540891 LOXL1Q08397 574 aaPredicted RBP14.42□□□□□ -0.1
CD9-209ENST00000540891 CARTPTQ16568 116 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms