RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 Q499Y3 187 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 HSD17B12Q53GQ0 312 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 WDR38Q5JTN6 314 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ABLIM2Q6H8Q1 611 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 DEGS2Q6QHC5 323 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 CREB3L2Q70SY1 520 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 C11orf40Q8WZ69 217 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 SF3B5Q9BWJ5 86 aaKnown RBP11.03□□□□□ -0.64
SMAD3-204ENST00000540846 COMMD4Q9H0A8 199 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 EXO5Q9H790 373 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 NOX4Q9NPH5 578 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 ABCB10Q9NRK6 738 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 DAPK2Q9UIK4 370 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 LRP12Q9Y561 859 aa11.03□□□□□ -0.64
SMAD3-204ENST00000540846 DOCK7Q96N67 2140 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 PHF3Q92576 2039 aaKnown RBP11.02□□□□□ -0.65
SMAD3-204ENST00000540846 IGHV3-15A0A0B4J1V0 119 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 NOTOA8MTQ0 251 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 NPIPA2E9PIF3 369 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 NPIPA3F8WFD2 350 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 SRSF10O75494 262 aaKnown RBP11.02□□□□□ -0.65
SMAD3-204ENST00000540846 ENPP1P22413 925 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 EIF1AXP47813 144 aaKnown RBP11.02□□□□□ -0.65
SMAD3-204ENST00000540846 CARD18P57730 90 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 SRYQ05066 204 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 KCNMB1Q16558 191 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 KRTCAP3Q53RY4 240 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 STEAP3Q658P3 488 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 OR7E24Q6IFN5 339 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 DCXRQ7Z4W1 244 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 TMEM123Q8N131 208 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 OR10H5Q8NGA6 315 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 RNF133Q8WVZ7 376 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 THRSPQ92748 146 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 TMEM54Q969K7 222 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 OR2M2Q96R28 347 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 SRRQ9GZT4 340 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 ZCCHC4Q9H5U6 513 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 CYB5R1Q9UHQ9 305 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 ADAM30Q9UKF2 790 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 COL6A6A6NMZ7 2263 aa11.02□□□□□ -0.65
SMAD3-204ENST00000540846 TRBV5-7A0A0A0MS05 114 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 A0A1W2PPL8 197 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 ACOD1A6NK06 481 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF716A6NP11 495 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 GPR171O14626 319 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 HPGDSO60760 199 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 SLC19A2O60779 497 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 TMCC2O75069 709 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 CSNK1A1P48729 337 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 MFGE8Q08431 387 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-204ENST00000540846 TRIM16LQ309B1 348 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 CEP78Q5JTW2 689 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 C10orf128Q5T292 105 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 IDNKQ5T6J7 187 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 CARD17Q5XLA6 110 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF544Q6NX49 715 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 LRFN4Q6PJG9 635 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 METAP1DQ6UB28 335 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-204ENST00000540846 PLXDC2Q6UX71 529 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 CATSPERDQ86XM0 798 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 LINC00346Q8IVM7 164 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF676Q8N7Q3 588 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 ZIC4Q8N9L1 334 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 GPR148Q8TDV2 347 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 MCHR2Q969V1 340 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 CPNE4Q96A23 557 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-204ENST00000540846 SARAFQ96BY9 339 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 DIRAS2Q96HU8 199 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 COX4I2Q96KJ9 171 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 SOSTQ9BQB4 213 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 CLCF1Q9UBD9 225 aa11.01□□□□□ -0.65
SMAD3-204ENST00000540846 A0A1W2PPK0 400 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 FABP12A6NFH5 140 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 ATXN7O15265 892 aaPredicted RBP11□□□□□ -0.65
SMAD3-204ENST00000540846 TMEM127O75204 238 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 RAF1P04049 648 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 QDPRP09417 244 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 OCM2P0CE71 109 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 OCMP0CE72 109 aaPredicted RBP11□□□□□ -0.65
SMAD3-204ENST00000540846 SRMP19623 302 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.651e-7■□□□□ 8.8
SMAD3-204ENST00000540846 APEX1P27695 318 aaKnown RBP11□□□□□ -0.65
SMAD3-204ENST00000540846 EVX1P49640 407 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 CNIH2Q6PI25 160 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 XKRXQ6PP77 449 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 FAM131AQ6UXB0 335 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 FOXL2NBQ6ZUU3 175 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 SPATC1Q76KD6 591 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 ZNF385AQ96PM9 386 aaKnown RBP11□□□□□ -0.65
SMAD3-204ENST00000540846 B3GAT2Q9NPZ5 323 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 FAIMQ9NVQ4 179 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 PAQR5Q9NXK6 330 aaPredicted RBP11□□□□□ -0.65
SMAD3-204ENST00000540846 GLTPQ9NZD2 209 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 CAMK2AQ9UQM7 478 aa11□□□□□ -0.65
SMAD3-204ENST00000540846 RCE1Q9Y256 329 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms