RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OR6N2Q8NGY6 317 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 CYGBQ8WWM9 190 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 RFKQ969G6 155 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 MAP6Q96JE9 813 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 FAIMQ9NVQ4 179 aa13.4□□□□□ -0.26
DDB1-218ENST00000540784 CCDC182A6NF36 153 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 OR6C6A6NF89 314 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 MPZL2O60487 215 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 SELENOFO60613 162 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 THBS4P35443 961 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 SNTB2Q13425 540 aaKnown RBP13.39□□□□□ -0.27
DDB1-218ENST00000540784 KEAP1Q14145 624 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 EIF2B1Q14232 305 aaKnown RBP13.39□□□□□ -0.27
DDB1-218ENST00000540784 TAF13Q15543 124 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 OCLNQ16625 522 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 SLC25A30Q5SVS4 291 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 MEDAGQ5VYS4 303 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 ZNF544Q6NX49 715 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 SLC16A9Q7RTY1 509 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 FBXL14Q8N1E6 418 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 ZNF454Q8N9F8 522 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 NRG4Q8WWG1 115 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 C4orf45Q96LM5 186 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 Q96MT0 163 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 ZNF582Q96NG8 517 aaPredicted RBP13.39□□□□□ -0.27
DDB1-218ENST00000540784 COQ7Q99807 217 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 VCX3BQ9H321 246 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 CA10Q9NS85 328 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 WARS2Q9UGM6 360 aaKnown RBP13.39□□□□□ -0.27
DDB1-218ENST00000540784 UNC79Q9P2D8 2635 aa13.39□□□□□ -0.27
DDB1-218ENST00000540784 SNTNA6NMZ2 147 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 FAM157BP0CG42 384 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 DNASE1P24855 282 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 HTR1FP30939 366 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 TTKP33981 857 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 GLRXP35754 106 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 SERPINF1P36955 418 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 NAA10P41227 235 aaPredicted RBP13.38□□□□□ -0.27
DDB1-218ENST00000540784 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
DDB1-218ENST00000540784 TMED1Q13445 227 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 AGAP6Q5VW22 663 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 THEM6Q8WUY1 208 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 SLC7A6Q92536 515 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 SLAMF6Q96DU3 332 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 DCLRE1CQ96SD1 692 aaKnown RBP13.38□□□□□ -0.27
DDB1-218ENST00000540784 ATF6BQ99941 703 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 BCL2L14Q9BZR8 327 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 OR51B6Q9H340 312 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 ELOVL3Q9HB03 270 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 CLN6Q9NWW5 311 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 HAO2Q9NYQ3 351 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 DNAJC27Q9NZQ0 273 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 ST6GALNAC2Q9UJ37 374 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 GRIP1Q9Y3R0 1128 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 CMAHPQ9Y471 501 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 ABCA4P78363 2273 aa13.38□□□□□ -0.27
DDB1-218ENST00000540784 F5H5K5 113 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 H0YAE9 185 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 H0YJX3 145 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 ENTPD6O75354 484 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 RAF1P04049 648 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 LCKP06239 509 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 MRPL3P09001 348 aaKnown RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 DBHP09172 617 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 OR4A8P0C604 315 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 PSKH1P11801 424 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 ATP6V1E1P36543 226 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 NUDT6P53370 316 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 HCCSP53701 268 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 RPS23P62266 143 aaKnown RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 ADARB1P78563 741 aaKnown RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 GGTLC2Q14390 218 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 RSPO1Q2MKA7 263 aaPredicted RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 PAMR1Q6UXH9 720 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 C1orf174Q8IYL3 243 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 ENTHD1Q8IYW4 607 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 MUC15Q8N387 334 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 OTOSQ8NHW6 89 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 ST7LQ8TDW4 575 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 IPCEF1Q8WWN9 437 aaPredicted RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 PIGTQ969N2 578 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 SPTSSAQ969W0 71 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 CNN2Q99439 309 aaKnown RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 ABHD6Q9BV23 337 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 ZNF442Q9H7R0 627 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 PNRC2Q9NPJ4 139 aaKnown RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 AASSQ9UDR5 926 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 LAMP5Q9UJQ1 280 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDB1-218ENST00000540784 LAMP3Q9UQV4 416 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 PLEKHA6Q9Y2H5 1048 aa13.37□□□□□ -0.27
DDB1-218ENST00000540784 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
DDB1-218ENST00000540784 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms