RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 NANOGNBQ7Z5D8 188 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 JAZF1Q86VZ6 243 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 KLHL36Q8N4N3 616 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 OR52E2Q8NGJ4 325 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 MOSPD2Q8NHP6 518 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 ABHD4Q8TB40 342 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 NRG4Q8WWG1 115 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 TAMM41Q96BW9 452 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 SPDL1Q96EA4 605 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 ECSITQ9BQ95 431 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 MS4A7Q9GZW8 240 aaPredicted RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 MMP27Q9H306 513 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 C1RLQ9NZP8 487 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 EIF3KQ9UBQ5 218 aaKnown RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 SLC7A7Q9UM01 511 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 PRPF19Q9UMS4 504 aaKnown RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 ANGPT4Q9Y264 503 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 NOTCH3Q9UM47 2321 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 IGHV3OR16-10A0A075B7F0 116 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TRAV40A0A0B4J280 105 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 KIR2DS1A0A191URI9 304 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 A0A1B0GWJ7 208 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 A0A1W2PRG6 482 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 FAM181BA6NEQ2 426 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 M0QX08 132 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 HOXA3O43365 443 aaPredicted RBP6.1□□□□□ -1.43
YBX3-209ENST00000540747 OR7A10O76100 309 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 GPANK1O95872 356 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 KNG1P01042 644 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 MT-ND1P03886 318 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 OPN1SWP03999 348 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 SCG5P05408 212 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 COX5BP10606 129 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 THRBP10828 461 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 CCNOP22674 350 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TUBG1P23258 451 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 LAP3P28838 519 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 AQP2P41181 271 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 ERFP50548 548 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 NUDT2P50583 147 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 GZMMP51124 257 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 DAP3P51398 398 aaKnown RBP6.1□□□□□ -1.43
YBX3-209ENST00000540747 RAG2P55895 527 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 ERVK-25P63136 954 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 FHL1Q13642 323 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 SELPLGQ14242 412 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 DEFB112Q30KQ8 113 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 ESCO2Q56NI9 601 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 RUNDC3AQ59EK9 446 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 ZNF362Q5T0B9 420 aaPredicted RBP6.1□□□□□ -1.43
YBX3-209ENST00000540747 FAM205BPQ63HN1 556 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 OLFML2AQ68BL7 652 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 LRRN1Q6UXK5 716 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 IZUMO2Q6UXV1 221 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 UNQ6126/PRO20091Q6UXV3 157 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 DHDDSQ86SQ9 333 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TMEM86BQ8N661 226 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 KIR3DL3Q8N743 410 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 LRRC75AQ8NAA5 344 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 C11orf65Q8NCR3 313 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 PFN4Q8NHR9 129 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 ITLN1Q8WWA0 313 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 RAB40AQ8WXH6 277 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 C4orf45Q96LM5 186 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 LRGUKQ96M69 825 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 DCLRE1CQ96SD1 692 aaKnown RBP6.1□□□□□ -1.43
YBX3-209ENST00000540747 CDRT15Q96T59 188 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 PKP2Q99959 881 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 ALG12Q9BV10 488 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 SSBP3Q9BWW4 388 aaPredicted RBP6.1□□□□□ -1.43
YBX3-209ENST00000540747 TXNIPQ9H3M7 391 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 Q9H521 79 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TMEM165Q9HC07 324 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 GCM1Q9NP62 436 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 CCNB1IP1Q9NPC3 277 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TUBG2Q9NRH3 451 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 INIPQ9NRY2 104 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 MAN2C1Q9NTJ4 1040 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 C20orf141Q9NUB4 165 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 TBCCD1Q9NVR7 557 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 OR5V1Q9UGF6 321 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 IL19Q9UHD0 177 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 SLC13A4Q9UKG4 626 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 CORO2BQ9UQ03 480 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 POMPQ9Y244 141 aa6.1□□□□□ -1.43
YBX3-209ENST00000540747 CLPSL1A2RUU4 121 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 DPPA5A6NC42 116 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 MCIDASD6RGH6 385 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 BLOC1S5-TXNDC5H3BN57 136 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 IFNL4K9M1U5 179 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 TIMM8AO60220 97 aaPredicted RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 CLPXO76031 633 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 HIST1H2ABP04908 130 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 SELEP16581 610 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 TNFRSF1AP19438 455 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 FUT1P19526 365 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 RBM34P42696 430 aaKnown RBP6.09□□□□□ -1.43
YBX3-209ENST00000540747 PROK1P58294 105 aa6.09□□□□□ -1.43
YBX3-209ENST00000540747 RPL15P61313 204 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms