RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 H2BFMP0C1H6 154 aa12.64□□□□□ -0.39
INO80E-203ENST00000540562 GABRA4P48169 554 aa12.64□□□□□ -0.39
INO80E-203ENST00000540562 SLC36A1Q7Z2H8 476 aa12.64□□□□□ -0.39
INO80E-203ENST00000540562 GKN2Q86XP6 184 aa12.64□□□□□ -0.39
INO80E-203ENST00000540562 ZNF248Q8NDW4 579 aa12.64□□□□□ -0.39
INO80E-203ENST00000540562 CNTD2Q9H8S5 307 aa12.64□□□□□ -0.39
INO80E-203ENST00000540562 AKIRIN1Q9H9L7 192 aaPredicted RBP12.64□□□□□ -0.39
INO80E-203ENST00000540562 VSX1Q9NZR4 365 aaPredicted RBP12.64□□□□□ -0.39
INO80E-203ENST00000540562 IGHV1OR15-9A0A0B4J2B8 117 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 PCP4L1A6NKN8 68 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 SLC17A2O00624 439 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 TIAF1O95411 115 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 IGKV3-11P04433 115 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 CSF2RBP32927 897 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 CAPZA2P47755 286 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 NHLRC3Q5JS37 347 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ELFN2Q5R3F8 820 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 TMEM81Q6P7N7 255 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 TRAPPC6BQ86SZ2 158 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 CLEC1AQ8NC01 280 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 PMM1Q92871 262 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 OR52A1Q9UKL2 312 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 NPTNQ9Y639 398 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 KCNMB2Q9Y691 235 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 FRG2CA6NGY1 282 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 B8ZZF3 427 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 HTR3BO95264 441 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 RAG2P55895 527 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 BATF2Q8N1L9 274 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 C12orf45Q8N5I9 185 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 LAT2Q9GZY6 243 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ADAM19Q9H013 955 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 IGLV1-36A0A0B4J1U3 117 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ATP1B3P54709 279 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 EGR3Q06889 387 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 FOXF1Q12946 379 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 DHRS2Q13268 280 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 KCTD18Q6PI47 426 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 FJX1Q86VR8 437 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ZNF584Q8IVC4 421 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ADAD2Q8NCV1 583 aaKnown RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ADAT3Q96EY9 351 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 ZDHHC12Q96GR4 267 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 ELL3Q9HB65 397 aaPredicted RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 MRTO4Q9UKD2 239 aaKnown RBP12.63□□□□□ -0.39
INO80E-203ENST00000540562 ETV7Q9Y603 341 aa12.63□□□□□ -0.39
INO80E-203ENST00000540562 PLPP3O14495 311 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 SHOXO15266 292 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 RAMP1O60894 148 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 HRH1P35367 487 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 ELAVL1Q15717 326 aaKnown RBP12.62□□□□□ -0.39
INO80E-203ENST00000540562 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
INO80E-203ENST00000540562 OR10K1Q8NGX5 313 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 OR52N5Q8NH56 324 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 OR51E1Q8TCB6 317 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 RNF128Q8TEB7 428 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 DAZLQ92904 295 aaKnown RBP12.62□□□□□ -0.39
INO80E-203ENST00000540562 PFDN2Q9UHV9 154 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 NBEAQ8NFP9 2946 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 LOC400499M0QZD8 3231 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 CD34P28906 385 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 GK2Q14410 553 aaPredicted RBP12.62□□□□□ -0.39
INO80E-203ENST00000540562 SGCBQ16585 318 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 ZNF660Q6AZW8 331 aaPredicted RBP12.62□□□□□ -0.39
INO80E-203ENST00000540562 OR6N1Q8NGY5 312 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 PHYHIPQ92561 330 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 PNPLA2Q96AD5 504 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 TXNIPQ9H3M7 391 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 LHX6Q9UPM6 363 aa12.62□□□□□ -0.39
INO80E-203ENST00000540562 A0A1W2PPC1 479 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 A8MVM7 634 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 SULT1B1O43704 296 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 GABRA1P14867 456 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
INO80E-203ENST00000540562 STARP49675 285 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 POLR2HP52434 150 aaKnown RBP12.61□□□□□ -0.39
INO80E-203ENST00000540562 PPP1R1AQ13522 171 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 ABHD12BQ7Z5M8 362 aaPredicted RBP12.61□□□□□ -0.39
INO80E-203ENST00000540562 TMEM41AQ96HV5 264 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 LRFN5Q96NI6 719 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 CST11Q9H112 138 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 KLHL13Q9P2N7 655 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 IGHV3-15A0A0B4J1V0 119 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 C5orf63A6NC05 138 aa12.61□□□□□ -0.39
INO80E-203ENST00000540562 SDCBPO00560 298 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms