RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TRIM40Q6P9F5 258 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TMEM99Q8N816 258 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 ACOT4Q8N9L9 421 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 PLPP5Q8NEB5 264 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR6T1Q8NGN1 323 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR14L1PQ8NHC6 308 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SYNPRQ8TBG9 265 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 MITD1Q8WV92 249 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SUSD6Q92537 303 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TSLPQ969D9 159 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CMBLQ96DG6 245 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 S100A16Q96FQ6 103 aaKnown RBP8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TMEM169Q96HH4 297 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SLC35E1Q96K37 410 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR8B4Q96RC9 309 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 RSPO3Q9BXY4 272 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SLC39A8Q9C0K1 460 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 NCDNQ9UBB6 729 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TRBV6-7A0A0A0MS04 114 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SOCS6O14544 535 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 GRM6O15303 877 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TSPAN15O95858 294 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SOD2P04179 222 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 HSD11B1P28845 292 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 HTR1FP30939 366 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 DEFB103AP81534 67 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 MIDNQ504T8 468 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CTSL3PQ5NE16 218 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 PWWP2BQ6NUJ5 590 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 GRINAQ7Z429 371 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 GBGT1Q8N5D6 347 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CLDN19Q8N6F1 224 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 GPR32P1Q8NGA4 272 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR1P1Q8NH06 330 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 OR2V1Q8NHB1 315 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CSGALNACT1Q8TDX6 532 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 CASTOR1Q8WTX7 329 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SMPDL3AQ92484 453 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 GNRHR2Q96P88 292 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 WFDC6Q9BQY6 131 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TMEM121BQ9BXQ6 578 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-214ENST00000540539 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 ARV1Q9H2C2 271 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 TMEM38AQ9H6F2 299 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 KIR3DX1Q9H7L2 352 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 DDIT4Q9NX09 232 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 IL19Q9UHD0 177 aa8.54□□□□□ -1.04
CLIP1-214ENST00000540539 PRG3Q9Y2Y8 225 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-214ENST00000540539 PDE4DIPQ5VU43 2346 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PTPRSQ13332 1948 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 A6NIZ1 184 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 NPIPA2E9PIF3 369 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 CTSLP07711 333 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 GIMD1P0DJR0 217 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 LIPCP11150 499 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 GTF2F2P13984 249 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PSMB6P28072 239 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 TEAD1P28347 426 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PNLIPRP1P54315 467 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 ELLP55199 621 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 C17orf67Q0P5P2 114 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 RAB41Q5JT25 222 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 TMEM240Q5SV17 173 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 C9orf57Q5W0N0 161 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 AWAT2Q6E213 333 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 GHSRQ92847 366 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 HMCESQ96FZ2 354 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 GFI1Q99684 422 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 MIEN1Q9BRT3 115 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 RNF126Q9BV68 326 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PARP12Q9H0J9 701 aaKnown RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 OR51I1Q9H343 314 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 MYNNQ9NPC7 610 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PPIAL4AQ9Y536 164 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 RANBP2P49792 3224 aaKnown RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 SERTM2A0A1B0GWG4 89 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 TVP23AA6NH52 213 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 CASTOR2A6NHX0 329 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 C17orf105B2RV13 164 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 EEF1E1-BLOC1S5C9J1V9 151 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 SCDO00767 359 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 HLA-AP01891 365 aaKnown RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 MELTFP08582 738 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 CSF1P09603 554 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PRPH2P23942 346 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 LMO1P25800 156 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PCSK1P29120 753 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 NTSP30990 170 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 SEC13P55735 322 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 TAS2R19P59542 299 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 DLK1P80370 383 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 TUSC3Q13454 348 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 PIN1Q13526 163 aaPredicted RBP8.53□□□□□ -1.04
CLIP1-214ENST00000540539 NR0B2Q15466 257 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 ENTPD8Q5MY95 495 aa8.53□□□□□ -1.04
CLIP1-214ENST00000540539 OVCH1Q7RTY7 1134 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms