RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TIMM17AQ99595 171 aa3.95□□□□□ -1.78
TRAV11-201ENST00000539512 UBE2ZQ9H832 354 aaPredicted RBP3.95□□□□□ -1.78
TRAV11-201ENST00000539512 GCNT4Q9P109 453 aa3.95□□□□□ -1.78
TRAV11-201ENST00000539512 VANGL2Q9ULK5 521 aa3.95□□□□□ -1.78
TRAV11-201ENST00000539512 MYO15BQ96JP2 1530 aa3.95□□□□□ -1.78
TRAV11-201ENST00000539512 AKNAQ7Z591 1439 aa3.95□□□□□ -1.78
TRAV11-201ENST00000539512 LAMC3Q9Y6N6 1575 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 TRBV9A0A0B4J1U6 114 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 RP2O75695 350 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CD3GP09693 182 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CT45A6P0DMU7 189 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CT45A5P0DMU8 189 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CT45A7P0DMV0 189 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 BCKDHBP21953 392 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 UQCRFS1P47985 274 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 PPP1CBP62140 327 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 LIPEQ05469 1076 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CT45A1Q5HYN5 189 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 GPR107Q5VW38 600 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 FBXW12Q6X9E4 464 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 Q6ZR03 302 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CBR4Q8N4T8 237 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 ZFP41Q8N8Y5 198 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 TTC29Q8NA56 475 aaPredicted RBP3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CHST4Q8NCG5 386 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 CT45A3Q8NHU0 189 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 VPS37BQ9H9H4 285 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 TMEM165Q9HC07 324 aa3.94□□□□□ -1.78
TRAV11-201ENST00000539512 ZNF608Q9ULD9 1512 aaPredicted RBP3.94□□□□□ -1.78
TRAV11-201ENST00000539512 IGKV6-21A0A0C4DH24 114 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 C7orf66A4D0T2 115 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 ZNF705GA8MUZ8 300 aaPredicted RBP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 SMKR1H3BMG3 65 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 L7N2F9 121 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 RAD51CO43502 376 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 EIF4E2O60573 245 aaKnown RBP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 CLDN11O75508 207 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 EIF4EP06730 217 aaKnown RBP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 SERPINE2P07093 398 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 U2AF2P26368 475 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 ZNF726P1Q15940 193 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 PGGHGQ32M88 737 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 ALKBH6Q3KRA9 238 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 BZW1Q7L1Q6 419 aaKnown RBP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 SSX9Q7RTT3 188 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 PIFOQ8TCI5 191 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 DUS3LQ96G46 650 aaKnown RBP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 XPO6Q96QU8 1125 aaKnown RBP3.93□□□□□ -1.78
TRAV11-201ENST00000539512 EDA2RQ9HAV5 297 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 SIRT7Q9NRC8 400 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 MTCH1Q9NZJ7 389 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 IGSF9BQ9UPX0 1349 aa3.93□□□□□ -1.78
TRAV11-201ENST00000539512 MTCL1Q9Y4B5 1905 aaKnown RBP3.92□□□□□ -1.78
TRAV11-201ENST00000539512 A0A1B0GW55 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 A0A1W2PQ67 120 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 LRCOL1A6NCL2 159 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 SCAMP2O15127 329 aaKnown RBP3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DUX4L2P0CJ85 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DUX4L3P0CJ86 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DUX4L5P0CJ88 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DUX4L6P0CJ89 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DUX4L7P0CJ90 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 MUC1P15941 1255 aaPredicted RBP3.92□□□□□ -1.78
TRAV11-201ENST00000539512 PRRX1P54821 245 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 CDKN2DP55273 166 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 TCEAL5Q5H9L2 206 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 CNPY4Q8N129 248 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 LGI3Q8N145 548 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 GABRG1Q8N1C3 465 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 SNX31Q8N9S9 440 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 NUBPLQ8TB37 319 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 C15orf40Q8WUR7 153 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 TCEAL3Q969E4 200 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DCPSQ96C86 337 aaKnown RBP3.92□□□□□ -1.78
TRAV11-201ENST00000539512 RBMXL1Q96E39 390 aaKnown RBP3.92□□□□□ -1.78
TRAV11-201ENST00000539512 OR10C1Q96KK4 312 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 PANX1Q96RD7 426 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 CCNB1IP1Q9NPC3 277 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DCAF16Q9NXF7 216 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 DUX4Q9UBX2 424 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 SLC17A4Q9Y2C5 497 aa3.92□□□□□ -1.78
TRAV11-201ENST00000539512 NACAE9PAV3 2078 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 SLIT3O75094 1523 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 TRAV19A0A0A6YYK7 116 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 CHST1O43916 411 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 OR2F2O95006 317 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 TPM2P07951 284 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 ART3Q13508 389 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 PIGHQ14442 188 aaPredicted RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 COX19Q49B96 90 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 TPTE2P1Q5T6R2 138 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 OR5K2Q8NHB8 316 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 ZNF461Q8TAF7 563 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 OR51E1Q8TCB6 317 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 RGP1Q92546 391 aaPredicted RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 L3HYPDHQ96EM0 354 aa3.91□□□□□ -1.78
TRAV11-201ENST00000539512 NARS2Q96I59 477 aaKnown RBP3.91□□□□□ -1.78
TRAV11-201ENST00000539512 PRRC1Q96M27 445 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms