RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CDC20Q12834 499 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OXA1LQ15070 435 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 VPS26BQ4G0F5 336 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ATAD3CQ5T2N8 411 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MFSD14CQ5VZR4 134 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RWDD4Q6NW29 188 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 IL34Q6ZMJ4 242 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF677Q86XU0 584 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 C6orf223Q8N319 242 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FTMTQ8N4E7 242 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ITFG1Q8TB96 612 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ACMSDQ8TDX5 336 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 GPX8Q8TED1 209 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DNAJB3Q8WWF6 145 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PANX2Q96RD6 677 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 UBXN6Q9BZV1 441 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SYT4Q9H2B2 425 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PPA2Q9H2U2 334 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SIAEQ9HAT2 523 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NOX3Q9HBY0 568 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CUTCQ9NTM9 273 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SMPXQ9UHP9 88 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CACNA1DQ01668 2161 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 EVC2Q86UK5 1308 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RYR3Q15413 4870 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PIK3C2AO00443 1686 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF106Q9H2Y7 1883 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 AGRNO00468 2067 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 IGLV11-55A0A075B6I3 123 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NSG1A0A0A6YYJ2 146 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SMCO2A6NFE2 343 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PDZK1P1A8MUH7 402 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PANO1I0J062 215 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RGS16O15492 202 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR10H3O60404 316 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MOSP00540 346 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ERCC1P07992 297 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 AQP2P41181 271 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NSG1P42857 185 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RPL29P47914 159 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RFX3P48380 749 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 DAP3P51398 398 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM33P57088 247 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR2B8PP59922 312 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 GSTO1P78417 241 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 C5orf64Q2M2E5 130 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FBXL19-AS1Q494R0 122 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 Q5W150 140 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SLC25A25Q6KCM7 469 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SASS6Q6UVJ0 657 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ACOT1Q86TX2 421 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 THOC6Q86W42 341 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FBXO16Q8IX29 292 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PRR22Q8IZ63 422 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SLC22A18ASQ8N1D0 253 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ARRDC1Q8N5I2 433 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SLC26A10Q8NG04 563 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OR10G6Q8NH81 332 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MRAPQ8TCY5 172 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 FAM151AQ8WW52 585 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CHCHD10Q8WYQ3 142 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 TNFRSF14Q92956 283 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 KIAA1143Q96AT1 154 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CLDN23Q96B33 292 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PPWD1Q96BP3 646 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NEURL3Q96EH8 262 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SDSLQ96GA7 329 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 TSNARE1Q96NA8 513 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SLC25A39Q9BZJ4 359 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 UBE2ZQ9H832 354 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 BEX1Q9HBH7 125 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 RPRD1BQ9NQG5 326 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF302Q9NR11 478 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 CCDC59Q9P031 241 aaKnown RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 VAPAQ9P0L0 249 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 UXTQ9UBK9 157 aaPredicted RBP0.74□□□□□ -2.29
HIF1A-204ENST00000539097 BTNL2Q9UIR0 455 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MGAT4AQ9UM21 535 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 NEU3Q9UQ49 428 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PLLPQ9Y342 182 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MROH7-TTC4A0A0A0MT08 1334 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ADGRA3Q8IWK6 1321 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 SPEF2Q9C093 1822 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PLXNB3Q9ULL4 1909 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 OTOFQ9HC10 1997 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 ANKRD31Q8N7Z5 1873 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 PREX2Q70Z35 1606 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 DNHD1Q96M86 4753 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 A0A075B6Q4 140 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 IGKV1D-13A0A0B4J2D9 117 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TUBAL3A6NHL2 446 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 OR5B21A6NL26 309 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 KLLNB2CW77 178 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 C19orf84I3L1E1 186 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 NDUFA2O43678 99 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 UGT1A9O60656 530 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 TIMP1P01033 207 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 IGKV1-13P0DP09 117 aa0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ATP1B2P14415 290 aaPredicted RBP0.73□□□□□ -2.29
HIF1A-204ENST00000539097 ANXA13P27216 316 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms