RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PLEKHA8Q96JA3 519 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 RBM4BQ9BQ04 359 aaKnown RBP11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 ALG12Q9BV10 488 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 TMEM165Q9HC07 324 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 EMC7Q9NPA0 242 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 TBCCD1Q9NVR7 557 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 STARD10Q9Y365 291 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 SH3GLB1Q9Y371 365 aa11.7□□□□□ -0.54
SMARCA4-206ENST00000538456 CLPSL1A2RUU4 121 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 NPIPB13A6NJU9 1138 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 NPIPB4C9JG80 1138 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 H7C1C5 153 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 NDUFA7O95182 113 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 SCG5P05408 212 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 PITPNBP48739 271 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 CRYBA2P53672 197 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 MAGOHP61326 146 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 RPL27P61353 136 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 LCN6P62502 163 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 GUCY1A3Q02108 690 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 FAM201AQ5SY85 155 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 GPR157Q5UAW9 335 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 SLC30A8Q8IWU4 369 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 OR8B3Q8NGG8 313 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 SLC7A6Q92536 515 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 NEIL1Q96FI4 390 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 OR8B2Q96RD0 313 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 TMEM246Q9BRR3 403 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 MIOXQ9UGB7 285 aa11.69□□□□□ -0.54
SMARCA4-206ENST00000538456 KIR2DS1A0A191URI9 304 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 SGCEO43556 437 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 TSPAN15O95858 294 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 TSPAN19P0C672 248 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 PIN1Q13526 163 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 HLXQ14774 488 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 ASPHD2Q6ICH7 369 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 Q6YL49 198 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 FOXL2NBQ6ZUU3 175 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 NLRC3Q7RTR2 1065 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 MOGAT3Q86VF5 341 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 MICU2Q8IYU8 434 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 HAVCR1Q96D42 359 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 MEGF10Q96KG7 1140 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 CGREF1Q99674 301 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 SLC30A2Q9BRI3 323 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 PCGF1Q9BSM1 259 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 CDADC1Q9BWV3 514 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 PRDM13Q9H4Q3 707 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 NOX4Q9NPH5 578 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 POLE4Q9NR33 117 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 RIMS3Q9UJD0 308 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 HIF3AQ9Y2N7 669 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 MED31Q9Y3C7 131 aa11.68□□□□□ -0.54
SMARCA4-206ENST00000538456 H0YL77 283 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 OR5F1O95221 314 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 SFTPBP07988 381 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 MELTFP08582 738 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 SELEP16581 610 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 TUBG1P23258 451 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 SLC18A1P54219 525 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 CTXN1P60606 82 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 SCRN3Q0VDG4 424 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 PDCD1Q15116 288 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 ZNF404Q494X3 552 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 INTS11Q5TA45 600 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 OTPQ5XKR4 325 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 FAM205BPQ63HN1 556 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 SYT9Q86SS6 491 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 FITM2Q8N6M3 262 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 BHLHE23Q8NDY6 225 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 OR10A6Q8NH74 314 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 FNDC8Q8TC99 324 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 RASSF5Q8WWW0 418 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 LIPHQ8WWY8 451 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 CCDC28BQ9BUN5 200 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 KAT8Q9H7Z6 458 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 TUBG2Q9NRH3 451 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 PTTG3PQ9NZH4 202 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 CLN8Q9UBY8 286 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 RNF114Q9Y508 228 aa11.67□□□□□ -0.54
SMARCA4-206ENST00000538456 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 LRRC30A6NM36 301 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 C22orf46C9J442 243 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 F5H5P2 479 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 ANGPT2O15123 496 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 IGF2P01344 180 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 COX5BP10606 129 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 IFI30P13284 250 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 CPT2P23786 658 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 OR1E2P47887 323 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 SRP9P49458 86 aaKnown RBP11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 NFYCQ13952 458 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 TAF9Q16594 264 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 VMACQ2NL98 169 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 HIST2H2BDQ6DRA6 164 aa11.66□□□□□ -0.54
SMARCA4-206ENST00000538456 OR2T2Q6IF00 324 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms