RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PMEPA1Q969W9 287 aa12.81□□□□□ -0.36
USP44-203ENST00000537435 MFFQ9GZY8 342 aa12.81□□□□□ -0.36
USP44-203ENST00000537435 SLCO5A1Q9H2Y9 848 aa12.81□□□□□ -0.36
USP44-203ENST00000537435 TTYH1Q9H313 450 aaPredicted RBP12.81□□□□□ -0.36
USP44-203ENST00000537435 MED9Q9NWA0 146 aa12.81□□□□□ -0.36
USP44-203ENST00000537435 KLK13Q9UKR3 277 aa12.81□□□□□ -0.36
USP44-203ENST00000537435 FARSAQ9Y285 508 aaKnown RBP12.81□□□□□ -0.36
USP44-203ENST00000537435 ARID1BQ8NFD5 2236 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ZNF736B4DX44 427 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 EIF1AYO14602 144 aaKnown RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 DUX1O43812 170 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 MYF5P13349 255 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ZNF28P17035 718 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ZP3P21754 424 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 CALCRP30988 508 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 FBXW4P57775 412 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 POU3F1Q03052 451 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 LY6G6FQ5SQ64 297 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 TMEM244Q5VVB8 128 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ZNF704Q6ZNC4 412 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 PRSS42Q7Z5A4 293 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 BPIFB2Q8N4F0 458 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ACBD4Q8NC06 268 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 THAP3Q8WTV1 239 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 NKD1Q969G9 470 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 MED29Q9NX70 200 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 SUSD2Q9UGT4 822 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 TRIOO75962 3097 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 TRAV14DV4A0A0A6YYC5 116 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 LOC390937A0A1W2PQ73 354 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 A6NJ64 397 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ZNF354AO60765 605 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 PIAS2O75928 621 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 CD74P04233 296 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 CSN2P05814 226 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 H2BFMP0C1H6 154 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 DAP3P51398 398 aaKnown RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 ZP4Q12836 540 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 PCK2Q16822 640 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 SCGB2B2Q4G0G5 96 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 ATPAF1Q5TC12 328 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 H1FNTQ75WM6 255 aaPredicted RBP12.8□□□□□ -0.36
USP44-203ENST00000537435 MISPQ8IVT2 679 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 OR1J2Q8NGS2 313 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 KCNK17Q96T54 332 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 MESP1Q9BRJ9 268 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 B3GNT4Q9C0J1 378 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 FBXO4Q9UKT5 387 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 VDAC3Q9Y277 283 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 SESN1Q9Y6P5 492 aa12.8□□□□□ -0.36
USP44-203ENST00000537435 COL5A1P20908 1838 aaPredicted RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 ANKUB1A6NFN9 424 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 RPA2P15927 270 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 LYPD6Q86Y78 171 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 CARFQ8N187 725 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 STEAP2Q8NFT2 490 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 OR4S1Q8NGB4 309 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 MFSD8Q8NHS3 518 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 ASB13Q8WXK3 278 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 DMRTA2Q96SC8 542 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 FGF21Q9NSA1 209 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 PFDN2Q9UHV9 154 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 ZNF230Q9UIE0 474 aaPredicted RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 FBXL2Q9UKC9 423 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 RHBDD3Q9Y3P4 386 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 SPEGQ15772 3267 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 SMAD9O15198 467 aaKnown RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 AQP8O94778 261 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 SPDEFO95238 335 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 TLE3Q04726 772 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 PAPD4Q6PIY7 484 aaKnown RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 ZNF584Q8IVC4 421 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 SPERTQ8NA61 448 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 OR6S1Q8NH40 331 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 FGGYQ96C11 551 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 ZNF501Q96CX3 271 aaPredicted RBP12.79□□□□□ -0.36
USP44-203ENST00000537435 SLC6A7Q99884 636 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 CNTD2Q9H8S5 307 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 ASXL3Q9C0F0 2248 aa12.79□□□□□ -0.36
USP44-203ENST00000537435 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 NUDT21O43809 227 aaKnown RBP12.78□□□□□ -0.36
USP44-203ENST00000537435 UBCP0CG48 685 aaKnown RBP12.78□□□□□ -0.36
USP44-203ENST00000537435 MPGP29372 298 aa12.78□□□□□ -0.36
USP44-203ENST00000537435 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms