RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 FAM157BP0CG42 384 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 APEX1P27695 318 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 EPHA2P29317 976 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SGCAQ16586 387 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ZIK1Q3SY52 487 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PABPC1L2AQ5JQF8 200 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 FAM27BQ5VT28 67 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SYT3Q9BQG1 590 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CDH20Q9HBT6 801 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 DYNLRB1Q9NP97 96 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MYOZ1Q9NP98 299 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CMC2Q9NRP2 79 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SMPD3Q9NY59 655 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 VSX1Q9NZR4 365 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 IQCMA0A1B0GVH7 501 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LOC390937A0A1W2PQ73 354 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SYNGR3O43761 229 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PTHP01270 115 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LAP3P28838 519 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 POLR2IP36954 125 aaKnown RBP15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PLP2Q04941 152 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 TBC1D28Q2M2D7 210 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 DNM1P34Q6PK57 102 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 NEU4Q8WWR8 484 aaPredicted RBP15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 FOXN4Q96NZ1 517 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 KCNN2Q9H2S1 579 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 VCX3BQ9H321 246 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 OR51B6Q9H340 312 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 TPK1Q9H3S4 243 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 TOR3AQ9H497 397 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CCNB1IP1Q9NPC3 277 aa15.33■□□□□ 0.05
TNFRSF1A-209ENST00000536717 M0R233 179 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 SURF4O15260 269 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 TLX2O43763 284 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CRABP1P29762 137 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 NR4A2P43354 598 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ERVS71-1P61550 626 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 PSG4Q00888 419 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 HSF2Q03933 536 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 SNAPC1Q16533 368 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CARTPTQ16568 116 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 RGS7BPQ6MZT1 257 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CYB561A3Q8NBI2 242 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 SLC37A3Q8NCC5 494 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 NPEPL1Q8NDH3 523 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 AKR7LQ8NHP1 331 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 PIMREGQ9BSJ6 248 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 RERGLQ9H628 205 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 RPRD1BQ9NQG5 326 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 TVP23BQ9NYZ1 205 aa15.33■□□□□ 0.04
TNFRSF1A-209ENST00000536717 OR6C68A6NDL8 312 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 SLC16A7O60669 478 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 SCG5P05408 212 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CST2P09228 141 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 DAOP14920 347 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 PAICSP22234 425 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 USF1P22415 310 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 GUCA1AP43080 201 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ALDH3B1P43353 468 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 UCP2P55851 309 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CRMP1Q14194 572 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 MAD2L1BPQ15013 274 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ZNF362Q5T0B9 420 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 OR1J2Q8NGS2 313 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 POM121L2Q96KW2 1035 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 BPESC1Q9GZL8 116 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 NUAK2Q9H093 628 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 DUSP13Q9UII6 198 aa15.32■□□□□ 0.04
TNFRSF1A-209ENST00000536717 LOC100509620A0A075B734 347 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 A0A1W2PPL8 197 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 KHDRBS3O75525 346 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CLPTM1O96005 669 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ERCC1P07992 297 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CTLA4P16410 223 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 STOMP27105 288 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 APLNRP35414 380 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ENDOGQ14249 297 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 GGTLC2Q14390 218 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 C12orf73Q69YU5 71 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 PRIMA1Q86XR5 153 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ZNF555Q8NEP9 628 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 OR2T4Q8NH00 348 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 NRG4Q8WWG1 115 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 HRASLS5Q96KN8 279 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 MBOAT4Q96T53 435 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ZNF416Q9BWM5 594 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 BCL2L14Q9BZR8 327 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 OR2H1Q9GZK4 316 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 MS4A5Q9H3V2 200 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 POLE4Q9NR33 117 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 YAE1D1Q9NRH1 226 aa15.31■□□□□ 0.04
TNFRSF1A-209ENST00000536717 IGLV3-9A0A075B6K5 115 aa15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 IGHV4-61A0A0C4DH41 118 aa15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 PRR23D1E9PI22 279 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 CRLF1O75462 422 aa15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 LCKP06239 509 aa15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 PRR23D2P0DMB1 279 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 ZNF250P15622 560 aa15.3■□□□□ 0.04
TNFRSF1A-209ENST00000536717 MSR1P21757 451 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms