RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CTSFQ9UBX1 484 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 SAR1BQ9Y6B6 198 aa3.49□□□□□ -1.85
PRKDC-208ENST00000536710 MN1Q10571 1320 aaPredicted RBP3.48□□□□□ -1.85
PRKDC-208ENST00000536710 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 IGLV3-16A0A075B6K0 115 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 IGLV1-36A0A0B4J1U3 117 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 IGHV5-51A0A0C4DH38 117 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 A0A1W2PP18 115 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 K7EMT4 169 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 KRT16P08779 473 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 TNFSF9P41273 254 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 RPS9P46781 194 aaKnown RBP3.48□□□□□ -1.85
PRKDC-208ENST00000536710 MNAT1P51948 309 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 UCNP55089 124 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 ARG2P78540 354 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 DOC2AQ14183 400 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 ZNF266Q14584 549 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 TRMT5Q32P41 509 aaKnown RBP3.48□□□□□ -1.85
PRKDC-208ENST00000536710 MBOAT2Q6ZWT7 520 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 METTL13Q8N6R0 699 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 CHST4Q8NCG5 386 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 OR56A4Q8NGH8 313 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 OR52E2Q8NGJ4 325 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 GLYATL2Q8WU03 294 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 SRSF12Q8WXF0 261 aaKnown RBP3.48□□□□□ -1.85
PRKDC-208ENST00000536710 SLC17A9Q9BYT1 436 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 BLZF1Q9H2G9 400 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 EDA2RQ9HAV5 297 aa3.48□□□□□ -1.85
PRKDC-208ENST00000536710 RCL1Q9Y2P8 373 aaKnown RBP3.48□□□□□ -1.85
PRKDC-208ENST00000536710 BCKDKO14874 412 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 ENTPD5O75356 428 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 BCHEP06276 602 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 ERGP11308 486 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 CTRB1P17538 263 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 RFC3P40938 356 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 P2RX1P51575 399 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 UBE2NP61088 152 aaKnown RBP3.47□□□□□ -1.85
PRKDC-208ENST00000536710 PPP1CBP62140 327 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 CDH17Q12864 832 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 HADHQ16836 314 aaKnown RBP3.47□□□□□ -1.85
PRKDC-208ENST00000536710 DEFB116Q30KQ4 102 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 HIKESHIQ53FT3 197 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 ABHD12BQ7Z5M8 362 aaPredicted RBP3.47□□□□□ -1.85
PRKDC-208ENST00000536710 ZNF547Q8IVP9 402 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 FAM71AQ8IYT1 594 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 FAM86B1Q8N7N1 296 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 SEH1LQ96EE3 360 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 ZNF285Q96NJ3 590 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 COL21A1Q96P44 957 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 FOXC2Q99958 501 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 SPNS1Q9H2V7 528 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 VCXQ9H320 206 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 C8orf33Q9H7E9 229 aaPredicted RBP3.47□□□□□ -1.85
PRKDC-208ENST00000536710 ZC4H2Q9NQZ6 224 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 TBX21Q9UL17 535 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 CARMIL3Q8ND23 1372 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 PLEKHG2Q9H7P9 1386 aa3.47□□□□□ -1.85
PRKDC-208ENST00000536710 TMEM120BA0PK00 339 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 TSPAN11A1L157 253 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 OR6C74A6NCV1 312 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 NCBP2LA6PVI3 153 aaKnown RBP3.46□□□□□ -1.86
PRKDC-208ENST00000536710 PLPP1O14494 284 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 CD3GP09693 182 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 IL32P24001 234 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 HCAR3P49019 387 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 BCAP31P51572 246 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 CLDN8P56748 225 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 RPS15AP62244 130 aaKnown RBP3.46□□□□□ -1.86
PRKDC-208ENST00000536710 RAB11AP62491 216 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 SEMG2Q02383 582 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 LRRC63Q05C16 580 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 ART3Q13508 389 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 NCF4Q15080 339 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 RAB11BQ15907 218 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 Q6P435 159 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 NPSR1Q6W5P4 371 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 FBXW12Q6X9E4 464 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 C8orf31Q8N9H6 132 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 ABHD3Q8WU67 409 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 APH1AQ96BI3 265 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 GALNT14Q96FL9 552 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 OR2A5Q96R48 311 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 LHX9Q9NQ69 397 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 CLN6Q9NWW5 311 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 KLK12Q9UKR0 248 aa3.46□□□□□ -1.86
PRKDC-208ENST00000536710 CDC42BPBQ9Y5S2 1711 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 A0A1W2PRD5 423 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 SYCE1LA8MT33 242 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ANKRD63C9JTQ0 380 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 AQP8O94778 261 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 ZNF823P16415 610 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 PGAM1P18669 254 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 RAB3AP20336 220 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 TUBG1P23258 451 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 NBL1P41271 181 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 SPAG1Q07617 926 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 PON2Q15165 354 aa3.45□□□□□ -1.86
PRKDC-208ENST00000536710 SNRNP35Q16560 246 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms