RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TEAD3Q99594 435 aa10.43□□□□□ -0.74
CHD4-203ENST00000535717 PITX2Q99697 317 aa10.43□□□□□ -0.74
CHD4-203ENST00000535717 CDH20Q9HBT6 801 aa10.43□□□□□ -0.74
CHD4-203ENST00000535717 FAM118AQ9NWS6 357 aa10.43□□□□□ -0.74
CHD4-203ENST00000535717 CHCHD3Q9NX63 227 aaKnown RBP10.43□□□□□ -0.74
CHD4-203ENST00000535717 SMPD3Q9NY59 655 aaPredicted RBP10.43□□□□□ -0.74
CHD4-203ENST00000535717 PLEK2Q9NYT0 353 aa10.43□□□□□ -0.74
CHD4-203ENST00000535717 GDF2Q9UK05 429 aaPredicted RBP10.43□□□□□ -0.74
CHD4-203ENST00000535717 MAST4O15021 2626 aa10.43□□□□□ -0.74
CHD4-203ENST00000535717 LOC100130705A0A1B0GUX0 176 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 C5orf49A4QMS7 147 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 SELENOFO60613 162 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 SPARCP09486 303 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 COX5BP10606 129 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 CCNOP22674 350 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 NR4A1P22736 598 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 HTR5AP47898 357 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 GDI2P50395 445 aaKnown RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 RPS7P62081 194 aaKnown RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 NKX6-1P78426 367 aaPredicted RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 RAB35Q15286 201 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 ELFN2Q5R3F8 820 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 NXNL2Q5VZ03 156 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 KRT80Q6KB66 452 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 TMEM154Q6P9G4 183 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 PAMR1Q6UXH9 720 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 MEPCEQ7L2J0 689 aaKnown RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 ERI1Q8IV48 349 aaKnown RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 NUP37Q8NFH4 326 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 OR1F12Q8NHA8 337 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 SLC7A6Q92536 515 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 PPP1R14BQ96C90 147 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 MAP6Q96JE9 813 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 INTS14Q96SY0 518 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 DHRS9Q9BPW9 319 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 YIPF3Q9GZM5 350 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 PNRC2Q9NPJ4 139 aaKnown RBP10.42□□□□□ -0.74
CHD4-203ENST00000535717 IMPAD1Q9NX62 359 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 LRCH1Q9Y2L9 728 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 GMPPBQ9Y5P6 360 aa10.42□□□□□ -0.74
CHD4-203ENST00000535717 CCDC168Q8NDH2 2452 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 SLC16A6O15403 523 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 TMCC2O75069 709 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 DANCRP0C864 163 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 THBS4P35443 961 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 WNT5AP41221 380 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 FABP6P51161 128 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 SNRPGP62308 76 aaKnown RBP10.41□□□□□ -0.74
CHD4-203ENST00000535717 GALK2Q01415 458 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
CHD4-203ENST00000535717 RSPO1Q2MKA7 263 aaPredicted RBP10.41□□□□□ -0.74
CHD4-203ENST00000535717 VHLLQ6RSH7 139 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 C20orf204Q6ZNR8 217 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 DPY19L4Q7Z388 723 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 DCXRQ7Z4W1 244 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 GID4Q8IVV7 300 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 OR10S1Q8NGN2 331 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 OR6N2Q8NGY6 317 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 ST7LQ8TDW4 575 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 TRUB1Q8WWH5 349 aaKnown RBP10.41□□□□□ -0.74
CHD4-203ENST00000535717 IGFBPL1Q8WX77 278 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 ZNF582Q96NG8 517 aaPredicted RBP10.41□□□□□ -0.74
CHD4-203ENST00000535717 HDHD2Q9H0R4 259 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 CA10Q9NS85 328 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 DNAJC27Q9NZQ0 273 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 H2AFY2Q9P0M6 372 aaPredicted RBP10.41□□□□□ -0.74
CHD4-203ENST00000535717 ST6GALNAC2Q9UJ37 374 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 PLEKHA6Q9Y2H5 1048 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 SPEF1Q9Y4P9 236 aa10.41□□□□□ -0.74
CHD4-203ENST00000535717 DSCAMO60469 2012 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 GPRIN2O60269 458 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ATE1O95260 518 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 CD8AP01732 235 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 RAF1P04049 648 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 SOD3P08294 240 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 MRPL3P09001 348 aaKnown RBP10.4□□□□□ -0.74
CHD4-203ENST00000535717 DBHP09172 617 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 FAM157BP0CG42 384 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 CD53P19397 219 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 PCSK6P29122 969 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 APOBEC3AP31941 199 aaPredicted RBP10.4□□□□□ -0.74
CHD4-203ENST00000535717 TTKP33981 857 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 NAA10P41227 235 aaPredicted RBP10.4□□□□□ -0.74
CHD4-203ENST00000535717 UCP2P55851 309 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 KEAP1Q14145 624 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 GGTLC2Q14390 218 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ADIPOQQ15848 244 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 MSMPQ1L6U9 139 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 SLC25A30Q5SVS4 291 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 LCN1P1Q5VSP4 162 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ZNF544Q6NX49 715 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 SHFQ7M4L6 423 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 CDH24Q86UP0 819 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ENTHD1Q8IYW4 607 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ZNF101Q8IZC7 436 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 ZNF555Q8NEP9 628 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 TMEM171Q8WVE6 324 aa10.4□□□□□ -0.74
CHD4-203ENST00000535717 CYGBQ8WWM9 190 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms