RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 IRGMA1A4Y4 181 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 EFCAB10A6NFE3 127 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 ZNF670-ZNF695F2Z2N8 137 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 M0R1B8 84 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 SYNGR3O43761 229 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 COX5BP10606 129 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 CRYGSP22914 178 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 STOMP27105 288 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 RAB35Q15286 201 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 RHOUQ7L0Q8 258 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 VASH1Q7L8A9 365 aaPredicted RBP13.54□□□□□ -0.24
CNN1-202ENST00000535659 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 OR10H4Q8NGA5 316 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 OR52I1Q8NGK6 324 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 OR1F12Q8NHA8 337 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 SLAMF6Q96DU3 332 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 AMELYQ99218 206 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 FGF20Q9NP95 211 aaPredicted RBP13.54□□□□□ -0.24
CNN1-202ENST00000535659 PNRC2Q9NPJ4 139 aaKnown RBP13.54□□□□□ -0.24
CNN1-202ENST00000535659 CENPMQ9NSP4 180 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 CNOT2Q9NZN8 540 aaKnown RBP13.54□□□□□ -0.24
CNN1-202ENST00000535659 COPS3Q9UNS2 423 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 MYRFQ9Y2G1 1151 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 KLHDC2Q9Y2U9 406 aa13.54□□□□□ -0.24
CNN1-202ENST00000535659 A0A1W2PQL4 384 aaPredicted RBP13.53□□□□□ -0.24
CNN1-202ENST00000535659 DPRXA6NFQ7 191 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 PTGES3LE9PB15 166 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 SLC1A7O00341 560 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 PHYHO14832 338 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 DOK2O60496 412 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 CELA3BP08861 270 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 APEX1P27695 318 aaKnown RBP13.53□□□□□ -0.24
CNN1-202ENST00000535659 ECH1Q13011 328 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 KCTD18Q6PI47 426 aaPredicted RBP13.53□□□□□ -0.24
CNN1-202ENST00000535659 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 ACBD7Q8N6N7 88 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 ZNF540Q8NDQ6 660 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 OR10S1Q8NGN2 331 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 RNF133Q8WVZ7 376 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 ASB17Q8WXJ9 295 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 TBX5Q99593 518 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 HDHD2Q9H0R4 259 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 ESRP2Q9H6T0 727 aaKnown RBP13.53□□□□□ -0.24
CNN1-202ENST00000535659 TPRKBQ9Y3C4 175 aa13.53□□□□□ -0.24
CNN1-202ENST00000535659 UTP20O75691 2785 aaKnown RBP13.52□□□□□ -0.24
CNN1-202ENST00000535659 LOC100509620A0A075B734 347 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 DAPL1A0PJW8 107 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 OR6C6A6NF89 314 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 CECR9P0C854 216 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 PIPP12273 146 aaPredicted RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 PTAFRP25105 342 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 CD40P25942 277 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 DCKP27707 260 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 APLNRP35414 380 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 GDI2P50395 445 aaKnown RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 ACTC1P68032 377 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 ACTA1P68133 377 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 ST3GAL4Q11206 333 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 DAZAP2Q15038 168 aaPredicted RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 TAF13Q15543 124 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 RBM48Q5RL73 367 aaKnown RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 ZNF322Q6U7Q0 402 aaPredicted RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 MYPOPQ86VE0 399 aaPredicted RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 SLC30A7Q8NEW0 376 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 OR1J2Q8NGS2 313 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 TMEM80Q96HE8 168 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 POM121L2Q96KW2 1035 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 COQ7Q99807 217 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 ATF6BQ99941 703 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 RHNO1Q9BSD3 238 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 FKBP14Q9NWM8 211 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 ATPIF1Q9UII2 106 aa13.52□□□□□ -0.25
CNN1-202ENST00000535659 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.25
CNN1-202ENST00000535659 ZNF878C9JN71 531 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 IGHA1P01876 353 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 CRHBPP24387 322 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 HTR5AP47898 357 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 ROM1Q03395 351 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 BEX5Q5H9J7 111 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 DEGS2Q6QHC5 323 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 AHSA2Q719I0 299 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 KRT77Q7Z794 578 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
CNN1-202ENST00000535659 IPCEF1Q8WWN9 437 aaPredicted RBP13.51□□□□□ -0.25
CNN1-202ENST00000535659 MYDGFQ969H8 173 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 PLPPR2Q96GM1 343 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 COPS4Q9BT78 406 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 MROQ9BYG7 248 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 DUSP21Q9H596 190 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 INPP5EQ9NRR6 644 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 KCNN3Q9UGI6 736 aa13.51□□□□□ -0.25
CNN1-202ENST00000535659 DIMT1Q9UNQ2 313 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms