RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 ELFN2Q5R3F8 820 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 SLC18B1Q6NT16 456 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 ZDHHC13Q8IUH4 622 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 HS3ST5Q8IZT8 346 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 CYB561A3Q8NBI2 242 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 MARS2Q96GW9 593 aaKnown RBP11.08□□□□□ -0.64
CCS-209ENST00000534763 VRK1Q99986 396 aaPredicted RBP11.08□□□□□ -0.64
CCS-209ENST00000534763 SYT3Q9BQG1 590 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 GABARAPL1Q9H0R8 117 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 SLC25A19Q9HC21 320 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
CCS-209ENST00000534763 MRPL22Q9NWU5 206 aaKnown RBP11.08□□□□□ -0.64
CCS-209ENST00000534763 NKIRAS2Q9NYR9 191 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 ENOPH1Q9UHY7 261 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 DUSP13Q9UII6 198 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 POLR1DQ9Y2S0 133 aa11.08□□□□□ -0.64
CCS-209ENST00000534763 PLCE1Q9P212 2302 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 MAP1AP78559 2803 aaPredicted RBP11.07□□□□□ -0.64
CCS-209ENST00000534763 LOC390937A0A1W2PQ73 354 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 ABHD16AO95870 558 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 GPANK1O95872 356 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 HLA-DQA2P01906 255 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 MT-ND5P03915 603 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 ADRA2AP08913 450 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 SPI1P17947 270 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 PAICSP22234 425 aaKnown RBP11.07□□□□□ -0.64
CCS-209ENST00000534763 GCH1P30793 250 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 FMO3P31513 532 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 LIPAP38571 399 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 ERFP50548 548 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 PPP1CBP62140 327 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 MRPS11P82912 194 aaKnown RBP11.07□□□□□ -0.64
CCS-209ENST00000534763 GINS1Q14691 196 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 MEP1BQ16820 701 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 PCGF3Q3KNV8 242 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 LRP11Q86VZ4 500 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
CCS-209ENST00000534763 ZNF540Q8NDQ6 660 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 OR2AJ1Q8NGZ0 328 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 KLF14Q8TD94 323 aaPredicted RBP11.07□□□□□ -0.64
CCS-209ENST00000534763 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 FAM168AQ92567 244 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 CENPNQ96H22 339 aaPredicted RBP11.07□□□□□ -0.64
CCS-209ENST00000534763 REG4Q9BYZ8 158 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 FN3KQ9H479 309 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 CYSLTR2Q9NS75 346 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 KIF17Q9P2E2 1029 aa11.07□□□□□ -0.64
CCS-209ENST00000534763 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
CCS-209ENST00000534763 A0A1W2PPW3 197 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 SURF4O15260 269 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 NGFP01138 241 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 POU1F1P28069 291 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 PDLIM4P50479 330 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 DAPP51397 102 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 CRISP1P54107 249 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 LINC01590Q5TEZ4 76 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 KDM4DQ6B0I6 523 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 ACSM5Q6NUN0 579 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 COLCA1Q6ZS62 124 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 RFPL4BQ6ZWI9 263 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 RHOUQ7L0Q8 258 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 ZNF786Q8N393 782 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 ZNF525Q8N782 197 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 OR5L1Q8NGL2 311 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 ABHD4Q8TB40 342 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 PTP4A1Q93096 173 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 ATF6BQ99941 703 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 MARCH7Q9H992 704 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 HINT3Q9NQE9 182 aaKnown RBP11.06□□□□□ -0.64
CCS-209ENST00000534763 DDX28Q9NUL7 540 aaKnown RBP11.06□□□□□ -0.64
CCS-209ENST00000534763 TAAR3PQ9P1P4 343 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 MYEF2Q9P2K5 600 aaKnown RBP11.06□□□□□ -0.64
CCS-209ENST00000534763 F8P00451 2351 aa11.06□□□□□ -0.64
CCS-209ENST00000534763 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 C17orf100A8MU93 164 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 VWC2LB2RUY7 222 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 RNF223E7ERA6 249 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 PRODHO43272 600 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 GLCEO94923 617 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 CLPTM1O96005 669 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 ADH4P08319 380 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 GIFP27352 417 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 PYCR1P32322 319 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 ALDH3B1P43353 468 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 ENTPD1P49961 510 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 ERVS71-1P61550 626 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 LOXL1Q08397 574 aaPredicted RBP11.05□□□□□ -0.64
CCS-209ENST00000534763 NKPD1Q17RQ9 610 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 ZMAT1Q5H9K5 638 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 SLC35D3Q5M8T2 416 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 CORO6Q6QEF8 472 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 CFAP77Q6ZQR2 320 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 IQCF1Q8N6M8 205 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 OR9Q1Q8NGQ5 310 aa11.05□□□□□ -0.64
CCS-209ENST00000534763 ZNRF4Q8WWF5 429 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms