RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TMEM89A2RUT3 159 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 GSAPA4D1B5 854 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 METTL15A6NJ78 407 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 OR52A4PA6NMU1 304 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 LINC00587B1AMM8 73 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 F8W036 122 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 RAD51BO15315 384 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 MFSD11O43934 449 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 LCMT2O60294 686 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 NOS1APO75052 506 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 SLC22A5O76082 557 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 SUPT7LO94864 414 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 PROSCO94903 275 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 TGM6O95932 706 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 C1QBP02746 253 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CAPN1P07384 714 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CHRNGP07510 517 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 BPGMP07738 259 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 HBQ1P09105 142 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 GIMD1P0DJR0 217 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 IL7P13232 177 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 F3P13726 295 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ADRB3P13945 408 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 HPGDP15428 266 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ZNF44P15621 663 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ZNF250P15622 560 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 BGNP21810 368 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ME2P23368 584 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 F8A1P23610 371 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CRHBPP24387 322 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 HLA-DMAP28067 261 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 PRDX2P32119 198 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ALDH3B1P43353 468 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 SLC6A8P48029 635 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CSNK1DP48730 415 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CSNK1EP49674 416 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 TNFSF10P50591 281 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 GEMP55040 296 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CARD18P57730 90 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 TPI1P60174 286 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 MRPS22P82650 360 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 DHODHQ02127 395 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ZNF45Q02386 682 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CDH17Q12864 832 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 MERTKQ12866 999 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 DOC2AQ14183 400 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 DPYSL3Q14195 570 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 FLOT2Q14254 428 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 PIGHQ14442 188 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 KCNJ11Q14654 390 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 PAFAH1B3Q15102 231 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 HKDC1Q2TB90 917 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ADPRMQ3LIE5 342 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CYBRD1Q53TN4 286 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CARD16Q5EG05 197 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CLLU1Q5K131 121 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 RBM48Q5RL73 367 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 TPRG1LQ5T0D9 272 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 SYT6Q5T7P8 510 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 RSBN1Q5VWQ0 802 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 CARD17Q5XLA6 110 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 NCBP2-AS2Q69YL0 99 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ELP2Q6IA86 826 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ZNF774Q6NX45 483 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 SCYL2Q6P3W7 929 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 NIPAL3Q6P499 406 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 DCUN1D2Q6PH85 259 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 HACD2Q6Y1H2 254 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 GCNT7Q6ZNI0 430 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 Q6ZPB1 254 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 CYS1Q717R9 158 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 UTS2BQ765I0 119 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 BIVMQ86UB2 503 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 SLC22A15Q8IZD6 547 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 DEFB107AQ8IZN7 70 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 C4orf33Q8N1A6 199 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 PQLC3Q8N755 202 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 UBL4BQ8N7F7 174 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ZNF321PQ8N8H1 164 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 OR2AP1Q8NGE2 309 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 OR4C15Q8NGM1 316 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 OR6K2Q8NGY2 324 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 OR52N1Q8NH53 320 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CDC26Q8NHZ8 85 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ZNF564Q8TBZ8 553 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 OR8D1Q8WZ84 308 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 MYDGFQ969H8 173 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 GLYATL1Q969I3 302 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.77□□□□□ -1.97
USP48-215ENST00000534705 PPWD1Q96BP3 646 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 ECHDC3Q96DC8 303 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ASB9Q96DX5 294 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CELF6Q96J87 481 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 BMFQ96LC9 184 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 C9orf72Q96LT7 481 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 GPR137Q96N19 417 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CSPG4P5Q96PW8 444 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 OR5M11Q96RB7 305 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 KLF6Q99612 283 aaPredicted RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 ATF6BQ99941 703 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms