RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SLC35E3Q7Z769 313 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 TMEM151BQ8IW70 566 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 ZNF511Q8NB15 262 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 OR52E1Q8NGJ3 308 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 TMEM255BQ8WV15 326 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 HMGB4Q8WW32 186 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 RTN4IP1Q8WWV3 396 aaPredicted RBP3.68□□□□□ -1.82
SOX6-217ENST00000533870 NXPE3Q969Y0 559 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 ANKRD9Q96BM1 317 aaPredicted RBP3.68□□□□□ -1.82
SOX6-217ENST00000533870 PTDSS2Q9BVG9 487 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 SLC25A18Q9H1K4 315 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 OR10A5Q9H207 317 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 OR10A2Q9H208 303 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 HRH4Q9H3N8 390 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 CALHM2Q9HA72 323 aa3.68□□□□□ -1.82
SOX6-217ENST00000533870 A0A087WWC5 75 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 A0A1W2PR48 441 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 LNP1A1A4G5 178 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CD300LBA8K4G0 201 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 FAM166BA8MTA8 275 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CDRT15L2A8MXV6 281 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CRYBA1P05813 215 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 VDAC1P21796 283 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 DTYMKP23919 212 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 NKX2-1P43699 371 aaPredicted RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 POLR2HP52434 150 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 EFNB1P98172 346 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ELAVL1Q15717 326 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 TAS1R1Q7RTX1 841 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 DPY19L4Q7Z388 723 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 C1QL4Q86Z23 238 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 SLC38A9Q8NBW4 561 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 OR11H7Q8NGC8 314 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 NUBPLQ8TB37 319 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 PPP1R14AQ96A00 147 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ZNF707Q96C28 371 aaPredicted RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 NKX2-4Q9H2Z4 354 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 IL21RQ9HBE5 538 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 MSRAQ9UJ68 235 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 HS3ST3A1Q9Y663 406 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 A0A0G2JK05 382 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 A0A1W2PRU2 124 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 DCDC2BA2VCK2 349 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 PSMD9O00233 223 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ZNF44P15621 663 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 RBP2P50120 134 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 POLR2GP62487 172 aaKnown RBP eCLIP3.67□□□□□ -1.82
SOX6-217ENST00000533870 RAE1P78406 368 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 FPGSQ05932 587 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 COTL1Q14019 142 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 TEAD2Q15562 447 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CST6Q15828 149 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CHRDL2Q6WN34 429 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ZNF600Q6ZNG1 722 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CACUL1Q86Y37 369 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 HSD17B11Q8NBQ5 300 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 OR10G4Q8NGN3 311 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 POC1BQ8TC44 478 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 SDSLQ96GA7 329 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 LMLNQ96KR4 655 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 PAAF1Q9BRP4 392 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ZNF768Q9H5H4 540 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 FN3KRPQ9HA64 309 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 Q9N2K0 584 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 HRASLS2Q9NWW9 162 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ZNF586Q9NXT0 402 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 VAX2Q9UIW0 290 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ST6GALNAC2Q9UJ37 374 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ABT1Q9ULW3 272 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 TRAV9-1A0A075B6T8 112 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 LOC100509620A0A075B734 347 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 A0A0B4J293 547 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 DNASE2O00115 360 aaPredicted RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 GPR31O00270 319 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 FRS3O43559 492 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ETHE1O95571 254 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ZBTB25P24278 435 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 BCL6P41182 706 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 SNRPEP62304 92 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 AKIRIN2Q53H80 203 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 GLYATL3Q5SZD4 288 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 TMEM225Q6GV28 225 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 LINC00346Q8IVM7 164 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 TMEM104Q8NE00 496 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 OR52H1Q8NGJ2 320 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 OR8S1Q8NH09 359 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ARRDC3Q96B67 414 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 IMMP2LQ96T52 175 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 NUDT9Q9BW91 350 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 CAPN10Q9HC96 672 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 TMEM100Q9NV29 134 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 NECAP2Q9NVZ3 263 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 B9D1Q9UPM9 204 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 ROBO1Q9Y6N7 1651 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 A0A1B0GVT2 93 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 C8orf89P0DMQ9 161 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 HNRNPA2B1P22626 353 aaKnown RBP3.67□□□□□ -1.82
SOX6-217ENST00000533870 DPP4P27487 766 aa3.67□□□□□ -1.82
SOX6-217ENST00000533870 EFNA3P52797 238 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms