RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 AURKCQ9UQB9 309 aa10.53□□□□□ -0.72
CAPRIN1-213ENST00000533562 SIGLEC7Q9Y286 467 aa10.53□□□□□ -0.72
CAPRIN1-213ENST00000533562 ISPDA4D126 451 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 J3QLI3 93 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 DEAF1O75398 565 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 CTLA4P16410 223 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 PRDX6P30041 224 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 OMPP47874 163 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 RPS6KA3P51812 740 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 SMIM11AP58511 58 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 TNFAIP6P98066 277 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 CDK5R2Q13319 367 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 KRR1Q13601 381 aaKnown RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 TMEM255AQ5JRV8 349 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 DCAF12L2Q5VW00 463 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 TSEN54Q7Z6J9 526 aaKnown RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR5L1Q8NGL2 311 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 ST7LQ8TDW4 575 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 PTP4A1Q93096 173 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 RASD2Q96D21 266 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 C7orf34Q96L11 122 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 SAMD8Q96LT4 415 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 GPX7Q96SL4 187 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 SYT4Q9H2B2 425 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 GORASP2Q9H8Y8 452 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 VSX1Q9NZR4 365 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 COA3Q9Y2R0 106 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 IER3IP1Q9Y5U9 82 aa10.52□□□□□ -0.73
CAPRIN1-213ENST00000533562 UNC119BA6NIH7 251 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 SOCS2O14508 198 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 SURF4O15260 269 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 KITLGP21583 273 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 CRABP1P29762 137 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 LIMS1P48059 325 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 RGS6P49758 472 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 DNM1P34Q6PK57 102 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 SMARCD3Q6STE5 483 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 THSD4Q6ZMP0 1018 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 USP43Q70EL4 1123 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR2Z1Q8NG97 314 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR52J3Q8NH60 311 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR1F12Q8NHA8 337 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 NANPQ8TBE9 248 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 HAVCR1Q96D42 359 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 CMBLQ96DG6 245 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 RSRC1Q96IZ7 334 aaKnown RBP10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 DCLRE1CQ96SD1 692 aaKnown RBP10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 NUAK2Q9H093 628 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 MYLK2Q9H1R3 596 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 UBAP1Q9NZ09 502 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 ASH2LQ9UBL3 628 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 IL20RAQ9UHF4 553 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 PURGQ9UJV8 347 aaKnown RBP10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 PCDHB10Q9UN67 800 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 STARD10Q9Y365 291 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
CAPRIN1-213ENST00000533562 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 TRBV4-1A0A0J9YWV2 114 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 OR6C6A6NF89 314 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 J3QW42 95 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 VENTXO95231 258 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 TXNDC12O95881 172 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 SBK2P0C263 348 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 RAC2P15153 192 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 EPHA1P21709 976 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 CENPAP49450 140 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 SEC23BQ15437 767 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 KCNMB1Q16558 191 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 SLC27A4Q6P1M0 643 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 C1orf94Q6P1W5 598 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 PGM2L1Q6PCE3 622 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 C1orf229Q6ZS94 237 aaPredicted RBP10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 KLHL36Q8N4N3 616 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 GJC3Q8NFK1 279 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 MCUR1Q96AQ8 359 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 PYURFQ96I23 114 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 DHRS1Q96LJ7 313 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 TMPRSS13Q9BYE2 586 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 C7orf69Q9H7B7 122 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 IL19Q9UHD0 177 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 ATPIF1Q9UII2 106 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 PPP1R3CQ9UQK1 317 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 POLR1DQ9Y2S0 133 aa10.5□□□□□ -0.73
CAPRIN1-213ENST00000533562 PPIAL4EA0A075B759 164 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 PPIAL4CA0A0B4J2A2 164 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 PPIAL4DF5H284 164 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 IMPA2O14732 288 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 RER1O15258 196 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 FOXH1O75593 365 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 DIRAS1O95057 198 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 GADD45GO95257 159 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 AVPP01185 164 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 PPIAL4FP0DN26 164 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 IFNGR2P38484 337 aa10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 CDKN2AP42771 156 aaKnown RBP10.49□□□□□ -0.73
CAPRIN1-213ENST00000533562 LCN2P80188 198 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms