RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GDF2Q9UK05 429 aaPredicted RBP14.9□□□□□ -0.02
CTSB-228ENST00000533455 FARSAQ9Y285 508 aaKnown RBP14.9□□□□□ -0.02
CTSB-228ENST00000533455 PLEKHA6Q9Y2H5 1048 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 F5P12259 2224 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 LOC107986453A0A1B0GWG9 222 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 DCDC2BA2VCK2 349 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 RAB19A4D1S5 217 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 CCSO14618 274 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 SLC25A12O75746 678 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 IGKV3-11P04433 115 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 GP1BBP13224 206 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 PGCP20142 388 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 CD1CP29017 333 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 CASRP41180 1078 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 ARRB1P49407 418 aaPredicted RBP14.9□□□□□ -0.02
CTSB-228ENST00000533455 MRPS21P82921 87 aaKnown RBP14.9□□□□□ -0.02
CTSB-228ENST00000533455 SPOCK1Q08629 439 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 FZD2Q14332 565 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 RNASE10Q5GAN6 216 aaKnown RBP14.9□□□□□ -0.02
CTSB-228ENST00000533455 PRAMEF17Q5VTA0 474 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 TMEM92Q6UXU6 159 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 PRR22Q8IZ63 422 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 JAGN1Q8N5M9 183 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 MRGPRFQ96AM1 343 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 SLC25A36Q96CQ1 311 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 GAL3ST1Q99999 423 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 PNO1Q9NRX1 252 aaKnown RBP14.9□□□□□ -0.02
CTSB-228ENST00000533455 GPR27Q9NS67 375 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 PRELID3BQ9Y3B1 194 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 MMACHCQ9Y4U1 282 aa14.9□□□□□ -0.02
CTSB-228ENST00000533455 ALPK2Q86TB3 2170 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 C9orf170A2RU37 121 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 CPED1A4D0V7 1026 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 WIPF3A6NGB9 483 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 ALG1L2C9J202 215 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 SIGLEC5O15389 551 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 PLATP00750 562 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 IGHV4-34P06331 123 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 CTSEP14091 401 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 CRABP1P29762 137 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 SIGLEC14Q08ET2 396 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 PPP1R1AQ13522 171 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 C1orf61Q13536 156 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 HYAL4Q2M3T9 481 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 C3orf33Q6P1S2 294 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 POMZP3Q6PJE2 187 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 FJX1Q86VR8 437 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 TMEM151BQ8IW70 566 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 TMEM185AQ8NFB2 350 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 CST11Q9H112 138 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 ZMAT3Q9HA38 289 aaKnown RBP14.89□□□□□ -0.03
CTSB-228ENST00000533455 RAB22AQ9UL26 194 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 KCNK7Q9Y2U2 307 aa14.89□□□□□ -0.03
CTSB-228ENST00000533455 TDRD6O60522 2096 aaKnown RBP14.89□□□□□ -0.03
CTSB-228ENST00000533455 THADAQ6YHU6 1953 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 TMED7-TICAM2A0A0A6YYA0 188 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 METTL21EPA6NDL7 271 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 B4DGG1 531 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 RAB27BO00194 218 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 FREM3P0C091 2139 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 H2AFB1P0C5Y9 115 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 CAPZBP47756 277 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 DCAF7P61962 342 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 GLO1Q04760 184 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 LRRC37A5PQ49AS3 106 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 CCDC157Q569K6 752 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.88□□□□□ -0.03
CTSB-228ENST00000533455 FAM109BQ6ICB4 259 aaPredicted RBP14.88□□□□□ -0.03
CTSB-228ENST00000533455 OR10K2Q6IF99 312 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 ZNF704Q6ZNC4 412 aaPredicted RBP14.88□□□□□ -0.03
CTSB-228ENST00000533455 OR4S1Q8NGB4 309 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 OR4D6Q8NGJ1 314 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 ZNF721Q8TF20 911 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 DNAJA3Q96EY1 480 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 SEC22AQ96IW7 307 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 OR8D2Q9GZM6 311 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 OR52A1Q9UKL2 312 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 TMED7Q9Y3B3 224 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 EMC9Q9Y3B6 208 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 KLF2Q9Y5W3 355 aaPredicted RBP14.88□□□□□ -0.03
CTSB-228ENST00000533455 FITM1A5D6W6 292 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 PLPP3O14495 311 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 FGF16O43320 207 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 GMFGO60234 142 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 TSPAN2O60636 221 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 ATG12O94817 140 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 WISP1O95388 367 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 DDAH2O95865 285 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 IL12BP29460 328 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 PRKXP51817 358 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 POLR2HP52434 150 aaKnown RBP14.88□□□□□ -0.03
CTSB-228ENST00000533455 CXADRP78310 365 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 INPP5JQ15735 1006 aaPredicted RBP14.88□□□□□ -0.03
CTSB-228ENST00000533455 NKPD1Q17RQ9 610 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 TMEM244Q5VVB8 128 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 MARCH3Q86UD3 253 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 ACBD4Q8NC06 268 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 STOML3Q8TAV4 291 aa14.88□□□□□ -0.03
CTSB-228ENST00000533455 THAP6Q8TBB0 222 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms