RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 MAVSQ7Z434 540 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 GOLGA7Q7Z5G4 137 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 ABI3BPQ7Z7G0 1075 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 CENPVQ7Z7K6 275 aaPredicted RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 SERPINA9Q86WD7 417 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 IZUMO1Q8IYV9 350 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 LGI3Q8N145 548 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR6V1Q8N148 313 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 PELI3Q8N2H9 469 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 Q8N402 240 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 CPXM2Q8N436 756 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 BPIFB2Q8N4F0 458 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 EID2Q8N6I1 236 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 SIDT2Q8NBJ9 832 aaKnown RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 GPR26Q8NDV2 337 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 CSNK2A3Q8NEV1 391 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR7G2Q8NG99 324 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR10H4Q8NGA5 316 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR4S1Q8NGB4 309 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR4D6Q8NGJ1 314 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR8J1Q8NGP2 316 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR9I1Q8NGQ6 314 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 CASTOR1Q8WTX7 329 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 DNAJB3Q8WWF6 145 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 TFAP2BQ92481 460 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 VOPP1Q96AW1 172 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 IGSF21Q96ID5 467 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 MARK4Q96L34 752 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 C12orf42Q96LP6 360 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 YPEL4Q96NS1 127 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 TP53RKQ96S44 253 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 MIEN1Q9BRT3 115 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 CBWD1Q9BRT8 395 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 ATG101Q9BSB4 218 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 RNF26Q9BY78 433 aaPredicted RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 CST9LQ9H4G1 147 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 PATZ1Q9HBE1 687 aaKnown RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 EXOSC3Q9NQT5 275 aaKnown RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 TUBG2Q9NRH3 451 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 C2orf42Q9NWW7 574 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 OR5AC2Q9NZP5 309 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 DOK5Q9P104 306 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 SEMA5BQ9P283 1151 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 FZD4Q9ULV1 537 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 AMDHD2Q9Y303 409 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 EXOSC1Q9Y3B2 195 aaKnown RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 LRP6O75581 1613 aa4.93□□□□□ -1.62
CD44-236ENST00000533222 AFDNP55196 1824 aaKnown RBP4.93□□□□□ -1.62
CD44-236ENST00000533222 SIGLEC1Q9BZZ2 1709 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 IGHV2OR16-5A0A0B4J2B6 119 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 IFITM5A6NNB3 132 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 HIDE1A8MVS5 230 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 K7EQM0 130 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 OR7A17O14581 309 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 MGST3O14880 152 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 YY2O15391 372 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CCL25O15444 150 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GJB3O75712 270 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 NFATC1O95644 943 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SLPIP03973 132 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 BCHEP06276 602 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 HOXB7P09629 217 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SMIM10L2AP0DMW4 78 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SMIM10L2BP0DMW5 78 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 OR13C7P0DN81 318 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 PIPP12273 146 aaPredicted RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 CD19P15391 556 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 AREGP15514 252 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 EGR1P18146 543 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ADCYAP1P18509 176 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CXCL2P19875 107 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GZMHP20718 246 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GADD45AP24522 165 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ACP1P24666 158 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ELAVL4P26378 380 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 PSMB5P28074 263 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 EPHA2P29317 976 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 PPIFP30405 207 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 MPLP40238 635 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CSNK1A1P48729 337 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 INPP1P49441 399 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 RAB7AP51149 207 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 FAM3AP98173 230 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 HOXC5Q00444 222 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 CDK5Q00535 292 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ZFP36L1Q07352 338 aaKnown RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 PJVKQ0ZLH3 352 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GRM4Q14833 912 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 PCK2Q16822 640 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 GSG1Q2KHT4 349 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ZNF750Q32MQ0 723 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 SLC22A6Q4U2R8 563 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 Q5PR19 223 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 ELFN2Q5R3F8 820 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 HECTD2Q5U5R9 776 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 OTUD1Q5VV17 481 aaPredicted RBP4.92□□□□□ -1.62
CD44-236ENST00000533222 TMEM198Q66K66 360 aa4.92□□□□□ -1.62
CD44-236ENST00000533222 TMEM42Q69YG0 159 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms