RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TACSTD2P09758 323 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 SMIM18P0DKX4 95 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF43P17038 809 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 COX5AP20674 150 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 IGHV1-2P23083 117 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC15A1P46059 708 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 DAP3P51398 398 aaKnown RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 RAP1BP61224 184 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 SNRPD2P62316 118 aaKnown RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 RAP1AP62834 184 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 DBPQ10586 325 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 KRR1Q13601 381 aaKnown RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 MELKQ14680 651 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 SWI5Q1ZZU3 235 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 KLHL12Q53G59 568 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 MESTQ5EB52 335 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 NXNL2Q5VZ03 156 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 TMEM154Q6P9G4 183 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 MEPCEQ7L2J0 689 aaKnown RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 GPAT4Q86UL3 456 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 IPCEF1Q8WWN9 437 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 ASB10Q8WXI3 467 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 RFKQ969G6 155 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 NMNAT2Q9BZQ4 307 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 BCO1Q9HAY6 547 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 PAK1IP1Q9NWT1 392 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 SCOCQ9UIL1 159 aa9.79□□□□□ -0.84
TRAPPC4-213ENST00000533149 EFCAB10A6NFE3 127 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 NPIPB13A6NJU9 1138 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 NPIPB4C9JG80 1138 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 H7C1C5 153 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 M0R1B8 84 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 TRAF3IP2O43734 574 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 RGS9O75916 674 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 CLUP10909 449 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 DBTP11182 482 aaKnown RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 ATP6V1B1P15313 513 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 GIFP27352 417 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 HTR1FP30939 366 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC25A1P53007 311 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 BIDP55957 195 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 GABARAPL2P60520 117 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 LCN6P62502 163 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC35A2P78381 396 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF91Q05481 1191 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 FOXL1Q12952 345 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 APOFQ13790 326 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC17A1Q14916 467 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZNF773Q6PK81 442 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 CREB3L2Q70SY1 520 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 AHSA2Q719I0 299 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 ADCK1Q86TW2 530 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 GLCCI1Q86VQ1 547 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 GID4Q8IVV7 300 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 WDFY1Q8IWB7 410 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 ZIC4Q8N9L1 334 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 OR9Q1Q8NGQ5 310 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 OR52N5Q8NH56 324 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 MYDGFQ969H8 173 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 MRPL24Q96A35 216 aaKnown RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 FBXO17Q96EF6 278 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 RNFT2Q96EX2 444 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 TEAD3Q99594 435 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 VRK1Q99986 396 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 COPS4Q9BT78 406 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 EMC6Q9BV81 110 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SF3B5Q9BWJ5 86 aaKnown RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 MRPS18AQ9NVS2 196 aaKnown RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 FKBP14Q9NWM8 211 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 ASB6Q9NWX5 421 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 MED29Q9NX70 200 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 CNOT2Q9NZN8 540 aaKnown RBP9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 KLHL9Q9P2J3 617 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC25A15Q9Y619 301 aa9.78□□□□□ -0.84
TRAPPC4-213ENST00000533149 SLC22A23A1A5C7 686 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 PRSS37A4D1T9 235 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 CCDC182A6NF36 153 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 TRIM64CA6NLI5 447 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF726A6NNF4 738 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 B4DSR2 109 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 RGS10O43665 173 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 CYTIPO60759 359 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 MRPS14O60783 128 aaKnown RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 TRMUO75648 421 aaKnown RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 RAD51DO75771 328 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 MT-ND2P03891 347 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 GYPBP06028 91 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 HTR1AP08908 422 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC2A5P22732 501 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 IL2RGP31785 369 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 PYCR1P32322 319 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 MTNR1AP48039 350 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 CLDN17P56750 224 aa9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 RPS7P62081 194 aaKnown RBP9.77□□□□□ -0.85
TRAPPC4-213ENST00000533149 ST3GAL4Q11206 333 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms