RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 RPUSD3Q6P087 351 aaKnown RBP6.95□□□□□ -1.3
CTNND1-233ENST00000532787 LYG2Q86SG7 212 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TMEM229BQ8NBD8 167 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 OR10P1Q8NGE3 313 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 FAM122AQ96E09 287 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 HCFC1R1Q9NWW0 138 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TRAPPC4Q9Y296 219 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 PMS2P1A4D2B8 440 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 F11P03951 625 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 CYC1P08574 325 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TCN2P20062 427 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 RPL12P30050 165 aaKnown RBP6.95□□□□□ -1.3
CTNND1-233ENST00000532787 SLC6A11P48066 632 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 CDK5Q00535 292 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 OR8B8Q15620 311 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 PHLDA2Q53GA4 152 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 PRAMEF5Q5TYX0 476 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 PRAMEF6Q5VXH4 476 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 RPL7L1Q6DKI1 246 aaKnown RBP6.95□□□□□ -1.3
CTNND1-233ENST00000532787 LINC00346Q8IVM7 164 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 BAP18Q8IXM2 172 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 MORN4Q8NDC4 146 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TAS2R4Q9NYW5 299 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 PISDQ9UG56 409 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 R4GMQ9 66 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TCRBV5S2A0A599 114 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 CDC14CA4D256 554 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 PLPP1O14494 284 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 DVL1O14640 695 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 SIX6O95475 246 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 FCER1GP30273 86 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 DVL1P1P54792 670 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-233ENST00000532787 LGALS4P56470 323 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 HSF1Q00613 529 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TPBGQ13641 420 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 ERV3-1Q14264 604 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 LIPNQ5VXI9 398 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 FAHD1Q6P587 224 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 CDC20BQ86Y33 519 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 ZNF573Q86YE8 665 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 EXD3Q8N9H8 876 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 ZNF511Q8NB15 262 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 SLC24A4Q8NFF2 622 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 OR5B3Q8NH48 314 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 WWTR1Q9GZV5 400 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 AKIP1Q9NQ31 210 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 FOXJ3Q9UPW0 622 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 SLC5A6Q9Y289 635 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 COA3Q9Y2R0 106 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-233ENST00000532787 FLVCR1Q9Y5Y0 555 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 SLCO1B1Q9Y6L6 691 aa6.95□□□□□ -1.3
CTNND1-233ENST00000532787 HMGN4O00479 90 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 LIMS3P0CW19 117 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 LIMS4P0CW20 117 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 DEFA4P12838 97 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 EN2P19622 333 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SLC6A12P48065 614 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SUMO3P55854 103 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 MAT1AQ00266 395 aaKnown RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SELENBP1Q13228 472 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 RIMKLAQ8IXN7 391 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 OR8U1Q8NH10 309 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 PIGTQ969N2 578 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 ZNF727A8MUV8 499 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 GPX5O75715 221 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 AQP8O94778 261 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 FBP1P09467 338 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 KCNJ3P48549 501 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 MMP15P51511 669 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SCAND1P57086 179 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SHISA6Q6ZSJ9 500 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 OR13D1Q8NGV5 346 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 PFN4Q8NHR9 129 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 MS4A6EQ96DS6 147 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 DHRS9Q9BPW9 319 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 ZNF2Q9BSG1 426 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 ACOXLQ9NUZ1 547 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 A0A0U1RQS6 177 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 A0A1B0GTW7 788 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 IFITM5A6NNB3 132 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 GABRA4P48169 554 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SRP9P49458 86 aaKnown RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 HYAL4Q2M3T9 481 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 OR5M10Q6IEU7 315 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 DLK2Q6UY11 383 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 ARIH2OSQ8N7S6 290 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SLAMF6Q96DU3 332 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SDF2Q99470 211 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 ZNF768Q9H5H4 540 aaKnown RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 PPT2Q9UMR5 302 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 H0YIG0 161 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 PHOX2AO14813 284 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 HOXC11O43248 304 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-233ENST00000532787 CD37P11049 281 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 ABCD3P28288 659 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 CDK5R1Q15078 307 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SHHQ15465 462 aa6.94□□□□□ -1.3
CTNND1-233ENST00000532787 SLC38A6Q8IZM9 456 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms