RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PGBD2Q6P3X8 592 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 USP51Q70EK9 711 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 OR6V1Q8N148 313 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 NPEPL1Q8NDH3 523 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 GJC3Q8NFK1 279 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 OR1F12Q8NHA8 337 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 GTF3AQ92664 365 aaKnown RBP14.68□□□□□ -0.06
PHRF1-204ENST00000532550 POP5Q969H6 163 aaKnown RBP14.68□□□□□ -0.06
PHRF1-204ENST00000532550 COG8Q96MW5 612 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 TRIM15Q9C019 465 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 EGLN1Q9GZT9 426 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 CGGBP1Q9UFW8 167 aaPredicted RBP14.68□□□□□ -0.06
PHRF1-204ENST00000532550 ZDHHC8Q9ULC8 765 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 LYVE1Q9Y5Y7 322 aa14.68□□□□□ -0.06
PHRF1-204ENST00000532550 COL6A5A8TX70 2615 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 SVEP1Q4LDE5 3571 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 TCRBV5S2A0A599 114 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 B4DSR2 109 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 DCTN6O00399 190 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 RER1O15258 196 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 TIMM8AO60220 97 aaPredicted RBP14.67□□□□□ -0.06
PHRF1-204ENST00000532550 GPANK1O95872 356 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 IGHV1-46P01743 117 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 T-ENOLP0DO92 83 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 SRD5A1P18405 259 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 CDH15P55291 814 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 PSG7Q13046 419 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 HFEQ30201 348 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 FAM98BQ52LJ0 330 aaKnown RBP14.67□□□□□ -0.06
PHRF1-204ENST00000532550 CCDC92Q53HC0 331 aaPredicted RBP14.67□□□□□ -0.06
PHRF1-204ENST00000532550 ZMAT1Q5H9K5 638 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 LCN8Q6JVE9 175 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 RPL13AP3Q6NVV1 102 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 OR52L1Q8NGH7 329 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 CLDND2Q8NHS1 167 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 PTP4A1Q93096 173 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 ELMOD3Q96FG2 381 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 C1orf159Q96HA4 380 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 LRGUKQ96M69 825 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 DIRC2Q96SL1 478 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 CDADC1Q9BWV3 514 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 MAGIXQ9H6Y5 334 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 RPRD1BQ9NQG5 326 aaKnown RBP14.67□□□□□ -0.06
PHRF1-204ENST00000532550 KLHL21Q9UJP4 597 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 PRPF19Q9UMS4 504 aaKnown RBP14.67□□□□□ -0.06
PHRF1-204ENST00000532550 STARD10Q9Y365 291 aa14.67□□□□□ -0.06
PHRF1-204ENST00000532550 IGLV1-36A0A0B4J1U3 117 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 OR6C6A6NF89 314 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 CCNB2O95067 398 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 GASTP01350 101 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 MAGEA2P43356 314 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 MS4A2Q01362 244 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 MVKQ03426 396 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 MEP1BQ16820 701 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 CR1LQ2VPA4 569 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 SLC36A3Q495N2 470 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 CLEC12AQ5QGZ9 265 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 SLC35F1Q5T1Q4 408 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 ZNF620Q6ZNG0 422 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 IL17RELQ6ZVW7 336 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 OR9Q2Q8NGE9 314 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 OR52E2Q8NGJ4 325 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 OR5L1Q8NGL2 311 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 SLC7A6Q92536 515 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 CMBLQ96DG6 245 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 DCLRE1CQ96SD1 692 aaKnown RBP14.66□□□□□ -0.06
PHRF1-204ENST00000532550 RACGAP1Q9H0H5 632 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 C1orf21Q9H246 121 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 EGLN3Q9H6Z9 239 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 TREM2Q9NZC2 230 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 ATPIF1Q9UII2 106 aa14.66□□□□□ -0.06
PHRF1-204ENST00000532550 TMEFF2Q9UIK5 374 aaPredicted RBP14.66□□□□□ -0.06
PHRF1-204ENST00000532550 OR6C68A6NDL8 312 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 ZSCAN5BA6NJL1 495 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 WNT9BO14905 357 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 HLA-DQA2P01906 255 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 TFP02787 698 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 GAAP10253 952 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 PCMT1P22061 227 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 RGS6P49758 472 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.65□□□□□ -0.06
PHRF1-204ENST00000532550 PPP1R8Q12972 351 aaKnown RBP14.65□□□□□ -0.06
PHRF1-204ENST00000532550 TMEM255AQ5JRV8 349 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 AVPI1Q5T686 147 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 ZBTB46Q86UZ6 589 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 SDR9C7Q8NEX9 313 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 OR4C15Q8NGM1 316 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 OR2AJ1Q8NGZ0 328 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 CCL17Q92583 94 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 RAB1CQ92928 201 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 TIMD4Q96H15 378 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 BTBD10Q9BSF8 475 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 REEP1Q9H902 201 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 MSL2Q9HCI7 577 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 TAS2R1Q9NYW7 299 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 IL20Q9NYY1 176 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 PURGQ9UJV8 347 aaKnown RBP14.65□□□□□ -0.06
PHRF1-204ENST00000532550 LHFPL6Q9Y693 200 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 CDH10Q9Y6N8 788 aa14.65□□□□□ -0.06
PHRF1-204ENST00000532550 CLDN25C9JDP6 229 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms