RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TBPP20226 339 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 PDLIM4P50479 330 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 TLE4Q04727 773 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 MIDNQ504T8 468 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 RPL7L1Q6DKI1 246 aaKnown RBP7.33□□□□□ -1.24
CSDE1-214ENST00000530886 OPN5Q6U736 354 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 TAF8Q7Z7C8 310 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 CPEB3Q8NE35 698 aaKnown RBP7.33□□□□□ -1.24
CSDE1-214ENST00000530886 OR8G5Q8NG78 346 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 OR8S1Q8NH09 359 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF417Q8TAU3 575 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 THRSPQ92748 146 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 FRZBQ92765 325 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 FGF13Q92913 245 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 ANKRD9Q96BM1 317 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-214ENST00000530886 C5orf34Q96MH7 638 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 SERINC2Q96SA4 455 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 SLC6A7Q99884 636 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 SGPP1Q9BX95 441 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 Q9N2J8 555 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 SIGLEC7Q9Y286 467 aa7.33□□□□□ -1.24
CSDE1-214ENST00000530886 STRAPQ9Y3F4 350 aaKnown RBP7.33□□□□□ -1.24
CSDE1-214ENST00000530886 LOC100289279A0A1B0GTE1 492 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF736B4DX44 427 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 EEF1E1-BLOC1S5C9J1V9 151 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 SOCS5O75159 536 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 SLC16A8O95907 504 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 AMBPP02760 352 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 TRGC2P03986 189 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ATP1B2P14415 290 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 APLNRP35414 380 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 GLIPR1P48060 266 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 RND2P52198 227 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 HSPB3Q12988 150 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ARSJQ5FYB0 599 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 YOD1Q5VVQ6 348 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 TMPRSS12Q86WS5 348 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF595Q8IYB9 648 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 FIBINQ8TAL6 211 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 SKA2Q8WVK7 121 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 DTD2Q96FN9 168 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 PRAP1Q96NZ9 151 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 OR2M4Q96R27 311 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 CDH20Q9HBT6 801 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 KLHL28Q9NXS3 571 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 USP36Q9P275 1121 aaKnown RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 VAX2Q9UIW0 290 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 GNG8Q9UK08 70 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 SLC13A4Q9UKG4 626 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 TLCD2A6NGC4 264 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 B4DEV8 164 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF354AO60765 605 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ALOX12BO75342 701 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 LYPD3O95274 346 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 RHOCP08134 193 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 MAKP20794 623 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 EFNB2P52799 333 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ERVFRD-1P60508 538 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 HSF1Q00613 529 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 KHDRBS2Q5VWX1 349 aaKnown RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ARHGAP11AQ6P4F7 1023 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 Q6ZVU0 165 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 KDM8Q8N371 416 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 JAGN1Q8N5M9 183 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 MFSD9Q8NBP5 474 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 MCHR1Q99705 422 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 GPR87Q9BY21 358 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 OR5AC2Q9NZP5 309 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 MSRAQ9UJ68 235 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 KCNK6Q9Y257 313 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 TMEM202A6NGA9 273 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ZIC2O95409 532 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 CYB5AP00167 134 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 IL6RP08887 468 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 NPPBP16860 134 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 NANOS3P60323 173 aaKnown RBP7.32□□□□□ -1.24
CSDE1-214ENST00000530886 FHL1Q13642 323 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 GDPD4Q6W3E5 623 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 RFLNAQ6ZTI6 216 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 SLC25A26Q70HW3 274 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ZNF101Q8IZC7 436 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 OR6K2Q8NGY2 324 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 OR4C6Q8NH72 309 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 OR5K2Q8NHB8 316 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 METTL21AQ8WXB1 218 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 ARSGQ96EG1 525 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 MS4A4AQ96JQ5 239 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 CNTNAP3Q9BZ76 1288 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 PRSS16Q9NQE7 514 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 MMP24Q9Y5R2 645 aa7.32□□□□□ -1.24
CSDE1-214ENST00000530886 C5orf51A6NDU8 294 aa7.31□□□□□ -1.24
CSDE1-214ENST00000530886 NPIPB15A6NHN6 443 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-214ENST00000530886 CEACAM18A8MTB9 384 aa7.31□□□□□ -1.24
CSDE1-214ENST00000530886 M0QYG6 137 aa7.31□□□□□ -1.24
CSDE1-214ENST00000530886 SAP18O00422 153 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms