RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TAS2R7Q9NYW3 318 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 RNF150Q9ULK6 438 aa5.65□□□□□ -1.5
CSDE1-213ENST00000530784 POLR3HQ9Y535 204 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-213ENST00000530784 FBN3Q75N90 2809 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 A0A1W2PR80 420 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 CXCL13O43927 109 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 CRCPO75575 148 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 IGKV1D-16P01601 117 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 IFI6P09912 130 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 SLC2A2P11168 524 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 PRPS2P11908 318 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 ME2P23368 584 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 AGTR1P30556 359 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 GABRA3P34903 492 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 ZNF41P51814 821 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 PPP5CP53041 499 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 FOXA1P55317 472 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 DMTNQ08495 405 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 VEZF1Q14119 521 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 TMEM44Q2T9K0 475 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 FAM71E1Q6IPT2 247 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 APOOLQ6UXV4 268 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 TIFABQ6ZNK6 161 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 GTPBP8Q8N3Z3 284 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 CCNYL1Q8N7R7 359 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 CEP112Q8N8E3 955 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 STEAP2Q8NFT2 490 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 OR2V1Q8NHB1 315 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 PIK3R3Q92569 461 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 RNF145Q96MT1 663 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 DCTN5Q9BTE1 182 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 IQCGQ9H095 443 aaKnown RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 TMEM185BQ9H7F4 350 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 RRAGDQ9NQL2 400 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 NSD1Q96L73 2696 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 ABCA4P78363 2273 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 MAP1AP78559 2803 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-213ENST00000530784 ACANP16112 2415 aa5.64□□□□□ -1.51
CSDE1-213ENST00000530784 H3BQF6 201 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 GOLGA8RI6L899 631 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 UBFD1O14562 309 aaKnown RBP5.63□□□□□ -1.51
CSDE1-213ENST00000530784 TNFSF11O14788 317 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 ARPC2O15144 300 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 CLOCKO15516 846 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 OXSR1O95747 527 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-213ENST00000530784 OPN1LWP04000 364 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 GSTA1P08263 222 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 ABHD2P08910 425 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 PABPC4LP0CB38 370 aaKnown RBP5.63□□□□□ -1.51
CSDE1-213ENST00000530784 HPGDP15428 266 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 PSMB1P20618 241 aaKnown RBP5.63□□□□□ -1.51
CSDE1-213ENST00000530784 IL32P24001 234 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 RAD23AP54725 363 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 NAA20P61599 178 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 ACSM1Q08AH1 577 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 TNK1Q13470 666 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 WHAMMP3Q1A5X7 153 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 CLEC12BQ2HXU8 276 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 PLPPR5Q32ZL2 321 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 HBMQ6B0K9 141 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 NOXRED1Q6NXP6 359 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 GALNT10Q86SR1 603 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 MISPQ8IVT2 679 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 CDRT4Q8N9R6 151 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 GATSQ8NAP1 163 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 OR6S1Q8NH40 331 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 FBXO30Q8TB52 745 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 ACMSDQ8TDX5 336 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 S100PBPQ96BU1 408 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 PPCDCQ96CD2 204 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 CCDC126Q96EE4 140 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 SH3YL1Q96HL8 342 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-213ENST00000530784 MUS81Q96NY9 551 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 MS4A4EQ96PG1 132 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 MED17Q9NVC6 651 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 WDR83OSQ9Y284 106 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 RNF115Q9Y4L5 304 aa5.63□□□□□ -1.51
CSDE1-213ENST00000530784 NINQ8N4C6 2090 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 A0A0J9YW62 118 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 A0A1W2PP18 115 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 GJE1A6NN92 205 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 SEC22BO75396 215 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 KCNK2O95069 426 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ALOX5P09917 674 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 MYL2P10916 166 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 GATA1P15976 413 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ELK4P28324 431 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 GCAP28676 217 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 LCN1P31025 176 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 SFTPDP35247 375 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 MAP3K8P41279 467 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 EIF1P41567 113 aaKnown RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CSNK2BP67870 215 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 FOXF1Q12946 379 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CAPRIN1Q14444 709 aaKnown RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ZNF239Q16600 458 aaKnown RBP5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CFAP157Q5JU67 520 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 CPTPQ5TA50 214 aa5.62□□□□□ -1.51
CSDE1-213ENST00000530784 ANKRD26P1Q6NSI1 321 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms