RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 FIS1Q9Y3D6 152 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 CUBNO60494 3623 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 ALPK2Q86TB3 2170 aa4.37□□□□□ -1.71
AMBRA1-209ENST00000529963 PLCE1Q9P212 2302 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NPIPA5A0A0B4J1W7 369 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 GOLGA8QA0A0J9YX86 632 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 A0A1W2PRV1 198 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CIB4A0PJX0 185 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 GOLGA8OA6NCC3 632 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SERINC4A6NH21 518 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 OR5H1A6NKK0 313 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CCT8L1PA6NM43 557 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NPIPA7E9PJI5 369 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 GOLGA8NF8WBI6 632 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 COPEO14579 308 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 LSM1O15116 133 aaKnown RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SCAMP2O15127 329 aaKnown RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF264O43296 627 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 BUB3O43684 328 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 XPNPEP2O43895 674 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 EFNA2O43921 213 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 AK1P00568 194 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CSF3P09919 207 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 LINC00032P0C843 101 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NPIPA8P0DM63 369 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 BCKDHAP12694 445 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CPA3P15088 417 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 IGHV1-2P23083 117 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SOAT1P35610 550 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CCT3P49368 545 aaKnown RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 FABP6P51161 128 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CASP9P55211 416 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 IRX1P78414 480 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 VLDLRP98155 873 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 LOXL1Q08397 574 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CBX3Q13185 183 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 QPRTQ15274 297 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 RAB35Q15286 201 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 TOMM34Q15785 309 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NDUFAF6Q330K2 333 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 RFTN2Q52LD8 501 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 PDLIM3Q53GG5 364 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SLC25A53Q5H9E4 307 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 FBXW9Q5XUX1 488 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CYB5R2Q6BCY4 276 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 RAB12Q6IQ22 244 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF544Q6NX49 715 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF771Q7L3S4 317 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 IFT20Q8IY31 132 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 UBE2J2Q8N2K1 259 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 MUC15Q8N387 334 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF433Q8N7K0 673 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 OR2T11Q8NH01 316 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 OR52I2Q8NH67 350 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SFXN5Q8TD22 340 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 TMEM234Q8WY98 164 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 OR5P2Q8WZ92 322 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ST8SIA1Q92185 356 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 APH1AQ96BI3 265 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZMYND19Q96E35 227 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZHX1-C8orf76Q96EF9 292 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 PPP3R2Q96LZ3 170 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 C16orf45Q96MC5 204 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF300Q96RE9 604 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 DHRS9Q9BPW9 319 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 KATNB1Q9BVA0 655 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 LAT2Q9GZY6 243 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CBLN4Q9NTU7 201 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ATAD3AQ9NVI7 634 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NPAP1Q9NZP6 1156 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 BAIAP2L1Q9UHR4 511 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ATP6V1HQ9UI12 483 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NOSIPQ9Y314 301 aaKnown RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SPIN1Q9Y657 262 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CR1P17927 2039 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 FREM1Q5H8C1 2179 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 MGAM2Q2M2H8 2515 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 A0A096LNT2 108 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 DUXAA6NLW8 204 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 C9JVG2 144 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 E7EQL1 145 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 NPIPB9F8W1W9 429 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 H7C417 338 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SULT2B1O00204 365 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 GPR171O14626 319 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 CFLARO15519 480 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 GPRIN2O60269 458 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 LYPLA1O75608 230 aaPredicted RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 RAD51DO75771 328 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 H6PDO95479 791 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 C6orf47O95873 294 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 PGCP20142 388 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 HNF1AP20823 631 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 PTNP21246 168 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 GABRA5P31644 462 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 ZNF83P51522 516 aa4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 SNU13P55769 128 aaKnown RBP4.36□□□□□ -1.71
AMBRA1-209ENST00000529963 RPL36AP83881 106 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms