RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CT45A8P0DMV1 189 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 CT45A9P0DMV2 189 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF708P17019 499 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 C4BPBP20851 252 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 LCN1P31025 176 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 SRD5A2P31213 254 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 MPIP34949 423 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 SLCO1A2P46721 670 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TRPC1P48995 793 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 LHX2P50458 406 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 CCNG1P51959 295 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 PLTPP55058 493 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 DSCR4P56555 118 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 FBXW4P57775 412 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 MRPS22P82650 360 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 HMGCS1Q01581 520 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 DDX39BQ13838 428 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 GANABQ14697 944 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 HEPACAMQ14CZ8 416 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 EIPR1Q53HC9 387 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 CT45A2Q5DJT8 189 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 SPANXN4Q5MJ08 99 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 LGSNQ5TDP6 509 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TIFABQ6ZNK6 161 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 COMMD6Q7Z4G1 85 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 ZER1Q7Z7L7 766 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 RNF175Q8N4F7 328 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TCEANCQ8N8B7 351 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 OR52B6Q8NGF0 335 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 OR10G7Q8NGN6 311 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 CNRIP1Q96F85 164 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 C16orf45Q96MC5 204 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 JSRP1Q96MG2 331 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 COL21A1Q96P44 957 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 MRPL57Q9BQC6 102 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 RBM24Q9BX46 236 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 OSBPL11Q9BXB4 747 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 DGCR6LQ9BY27 220 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 LIME1Q9H400 295 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 ELOVL6Q9H5J4 265 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 METTL7AQ9H8H3 244 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 PAQR5Q9NXK6 330 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF226Q9NYT6 803 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 TAS2R9Q9NYW1 312 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 VPS29Q9UBQ0 182 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 UBQLN2Q9UHD9 624 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 PCTPQ9UKL6 214 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 STK38LQ9Y2H1 464 aa3.83□□□□□ -1.8
CSDE1-212ENST00000529046 RRP15Q9Y3B9 282 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 PRRC2AP48634 2157 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 INTS1Q8N201 2190 aaKnown RBP3.83□□□□□ -1.8
CSDE1-212ENST00000529046 ANKHD1Q8IWZ3 2542 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ABCA2Q9BZC7 2435 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ARHGAP21Q5T5U3 1957 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 IGLV3-32A0A0A0MS00 114 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 IGHV3-38A0A0C4DH36 116 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 A0A0J9YWU9 116 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 A0A1W2PNV4 684 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 E5RGE8 158 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 CASKO14936 926 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 EMC8O43402 210 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SMIM24O75264 130 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 UGT2B11O75310 529 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SH3BGRLO75368 114 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PSMG1O95456 288 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PDYNP01213 254 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 KRT6AP02538 564 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 KRT6BP04259 564 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 IMPDH1P20839 514 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 NT5EP21589 574 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 CRYGSP22914 178 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 DEKP35659 375 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 KRT6CP48668 564 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PSMD4P55036 377 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 CLDN18P56856 261 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PLCXD2Q0VAA5 305 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 GUSBP1Q15486 140 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 IQCCQ4KMZ1 466 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 TRMT12Q53H54 448 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SPIN4Q56A73 249 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 AGAP6Q5VW22 663 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 TTC19Q6DKK2 380 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ANGPTL8Q6UXH0 198 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 TMEM64Q6YI46 380 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 GTSCR1Q86UQ5 136 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 IFNEQ86WN2 208 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SLC22A9Q8IVM8 553 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PHC2Q8IXK0 858 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 OR2L13Q8N349 312 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 FADS6Q8N9I5 356 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 OR4F6Q8NGB9 312 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 OR52R1Q8NGF1 315 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 LINC01560Q8TB33 94 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 NRGNQ92686 78 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ANP32BQ92688 251 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 VSTM2LQ96N03 204 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF382Q96SR6 550 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SLC39A3Q9BRY0 314 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms