RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TSPAN31Q12999 210 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 MOGQ16653 247 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ACTBL2Q562R1 376 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 BEND6Q5SZJ8 279 aaPredicted RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 DDI2Q5TDH0 399 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 KHDRBS2Q5VWX1 349 aaKnown RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 LEMD1Q68G75 181 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ADNP2Q6IQ32 1131 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ACSM5Q6NUN0 579 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 EMBQ6PCB8 327 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 LINC00336Q6ZUF6 198 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ZNF100Q8IYN0 542 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 IQCKQ8N0W5 287 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 SLC39A11Q8N1S5 342 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 CDRT4Q8N9R6 151 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 RELL2Q8NC24 303 aaPredicted RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 OR56A4Q8NGH8 313 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 MRAPQ8TCY5 172 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ACOT11Q8WXI4 607 aaPredicted RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 CPNE4Q96A23 557 aaPredicted RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 CPXM1Q96SM3 734 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 UCK2Q9BZX2 261 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 NXF3Q9H4D5 531 aaKnown RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 ANKHQ9HCJ1 492 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 ZC4H2Q9NQZ6 224 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 DCAF13Q9NV06 445 aaKnown RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 RAB23Q9ULC3 237 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 SCML2Q9UQR0 700 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 AK6Q9Y3D8 172 aaKnown RBP4.54□□□□□ -1.68
PCF11-202ENST00000528336 LOC285556D6RIA3 1793 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 HCFC1P51610 2035 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 MYH8P13535 1937 aa4.54□□□□□ -1.68
PCF11-202ENST00000528336 FRMPD3Q5JV73 1810 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 LRIT2A6NDA9 550 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 LRRN3E7EW58 273 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CLDN34H7C241 214 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 HAT1O14929 419 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 HSBP1O75506 76 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SC5DO75845 299 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 AP2A1O95782 977 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 MMP1P03956 469 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CALM1P0DP23 149 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CALM2P0DP24 149 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CALM3P0DP25 149 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 BCL3P20749 454 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 PSMB5P28074 263 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 KDELR2P33947 212 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 TNFSF9P41273 254 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 MAP3K8P41279 467 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CEBPGP53567 150 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 PKNOX1P55347 436 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 NUP107P57740 925 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 RIGQ13278 110 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 MADCAM1Q13477 382 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 RPEL1Q2QD12 228 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 EIPR1Q53HC9 387 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CYBRD1Q53TN4 286 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 PIGGQ5H8A4 983 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SAMD4BQ5PRF9 694 aaKnown RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 SLC25A30Q5SVS4 291 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 ATRAIDQ6UW56 229 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 BTNL3Q6UXE8 466 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 HACD2Q6Y1H2 254 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 MBOAT1Q6ZNC8 495 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 ZNF621Q6ZSS3 439 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CEACAM19Q7Z692 300 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CRLF3Q8IUI8 442 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SLC35F2Q8IXU6 374 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 BOD1L2Q8IYS8 172 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 ZBED8Q8IZ13 594 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 ABCA7Q8IZY2 2146 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SPAG16Q8N0X2 631 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 TTC29Q8NA56 475 aaPredicted RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 CSNK1G2-AS1Q8NCQ2 148 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 OR6X1Q8NH79 312 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 CA5BP1Q8WTZ4 195 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 ART4Q93070 314 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 RNF170Q96K19 258 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 DNAJC1Q96KC8 554 aaKnown RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 NXF5Q9H1B4 397 aaKnown RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 PPA2Q9H2U2 334 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SLC40A1Q9NP59 571 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 RMND1Q9NWS8 449 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 DUS2Q9NX74 493 aaKnown RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 MAT2BQ9NZL9 334 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 GALPQ9UBC7 116 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 EXOSC1Q9Y3B2 195 aaKnown RBP4.53□□□□□ -1.68
PCF11-202ENST00000528336 ALG6Q9Y672 507 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 SAR1BQ9Y6B6 198 aa4.53□□□□□ -1.68
PCF11-202ENST00000528336 PTPRFP10586 1907 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 IGHV3-16A0A0C4DH30 117 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 KLF18A0A0U1RQI7 1052 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TEX48A0A1B0GUV7 120 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 LOC105371267A0A1B0GV96 52 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 A0A1B0GVY2 172 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 A0A1W2PRF3 423 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 A0A1W2PRM7 423 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 SLC22A20A6NK97 555 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms