RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ECH1Q13011 328 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 MAD2L1BPQ15013 274 aaPredicted RBP8.2□□□□□ -1.1
CHD7-208ENST00000528280 FAM98BQ52LJ0 330 aaKnown RBP8.2□□□□□ -1.1
CHD7-208ENST00000528280 SLC27A4Q6P1M0 643 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 FAM86B1Q8N7N1 296 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 OR52L1Q8NGH7 329 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 ABHD4Q8TB40 342 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 SLC25A40Q8TBP6 338 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 FANK1Q8TC84 345 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 TMEM158Q8WZ71 300 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 RASD2Q96D21 266 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 ELMOD3Q96FG2 381 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 LRGUKQ96M69 825 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 RAB3IPQ96QF0 476 aaPredicted RBP8.2□□□□□ -1.1
CHD7-208ENST00000528280 IFT27Q9BW83 186 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 OR2J1Q9GZK6 312 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 NUAK2Q9H093 628 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 SYT4Q9H2B2 425 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 OR52D1Q9H346 318 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 YY1AP1Q9H869 796 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
CHD7-208ENST00000528280 PLEK2Q9NYT0 353 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 MYEF2Q9P2K5 600 aaKnown RBP8.2□□□□□ -1.1
CHD7-208ENST00000528280 KLHL21Q9UJP4 597 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 B9D1Q9UPM9 204 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 V9GYQ6 96 aa8.2□□□□□ -1.1
CHD7-208ENST00000528280 LRP5LA4QPB2 252 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 CLDN25C9JDP6 229 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 LYNX1G3V0Z9 82 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 H7C1C5 153 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 SURF4O15260 269 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 DOK2O60496 412 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 UBOX5O94941 541 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 LYNX1P0DP58 116 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 SRD5A1P18405 259 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 WNT5AP41221 380 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 MAGEB1P43366 347 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 MMP15P51511 669 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 DVL1P1P54792 670 aaPredicted RBP8.19□□□□□ -1.1
CHD7-208ENST00000528280 CDH15P55291 814 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 LCN6P62502 163 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 SCGB2A2Q13296 93 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 SNCBQ16143 134 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 ALKBH6Q3KRA9 238 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 FAM120AOSQ5T036 256 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 LEG1Q6P5S2 330 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 VASH1Q7L8A9 365 aaPredicted RBP8.19□□□□□ -1.1
CHD7-208ENST00000528280 ZNF101Q8IZC7 436 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 OR2AJ1Q8NGZ0 328 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 OR1F12Q8NHA8 337 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 HAVCR1Q96D42 359 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 COQ7Q99807 217 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 RACGAP1Q9H0H5 632 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 SAP30LQ9HAJ7 183 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 EMC7Q9NPA0 242 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 ZNF275Q9NSD4 429 aaPredicted RBP8.19□□□□□ -1.1
CHD7-208ENST00000528280 IL20RAQ9UHF4 553 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 TMEFF2Q9UIK5 374 aaPredicted RBP8.19□□□□□ -1.1
CHD7-208ENST00000528280 KCNG2Q9UJ96 466 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 BAIAP2Q9UQB8 552 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 POLR1DQ9Y2S0 133 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 GRIP1Q9Y3R0 1128 aa8.19□□□□□ -1.1
CHD7-208ENST00000528280 IFNL4K9M1U5 179 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 SPRY3O43610 288 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 TIMM8AO60220 97 aaPredicted RBP8.18□□□□□ -1.1
CHD7-208ENST00000528280 CCNB2O95067 398 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 PPP1R3DO95685 299 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 NGFP01138 241 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 SCG5P05408 212 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 CD55P08174 381 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 RAC2P15153 192 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ZNF823P16415 610 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ZNF16P17020 682 aaPredicted RBP8.18□□□□□ -1.1
CHD7-208ENST00000528280 TNFRSF1AP19438 455 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 KITLGP21583 273 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 MAGEA2P43356 314 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 BLVRAP53004 296 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 FXYD6P3P58550 94 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ERVS71-1P61550 626 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 HIST1H3AP68431 136 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 COX10Q12887 443 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 TRAP1Q12931 704 aaKnown RBP8.18□□□□□ -1.1
CHD7-208ENST00000528280 CDK5R2Q13319 367 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 TSTQ16762 297 aaKnown RBP8.18□□□□□ -1.1
CHD7-208ENST00000528280 HIST2H3PS2Q5TEC6 136 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 LCN8Q6JVE9 175 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ACSM5Q6NUN0 579 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 CYP2R1Q6VVX0 501 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 RASSF6Q6ZTQ3 369 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 PTCHD4Q6ZW05 846 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 HIST2H3AQ71DI3 136 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ASRGL1Q7L266 308 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ZBTB46Q86UZ6 589 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 GLCCI1Q86VQ1 547 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 OR6V1Q8N148 313 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 OR2T4Q8NH00 348 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 YIPF5Q969M3 257 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 APOBEC3DQ96AK3 386 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms