RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ADH1CP00326 375 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 ZNF735P0CB33 412 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 DNASE1L1P49184 302 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 EXOSC7Q15024 291 aaKnown RBP11.28□□□□□ -0.6
TSKU-203ENST00000527881 CACUL1Q86Y37 369 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 CSNK1A1LQ8N752 337 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 TMEM104Q8NE00 496 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 KCNE5Q9UJ90 142 aa11.28□□□□□ -0.6
TSKU-203ENST00000527881 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 UPK3AO75631 287 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 CX3CR1P49238 355 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 METAP1P53582 386 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 PRDX1Q06830 199 aaKnown RBP11.27□□□□□ -0.6
TSKU-203ENST00000527881 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.6
TSKU-203ENST00000527881 RHEBQ15382 184 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 MORN1Q5T089 497 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 TCEAL6Q6IPX3 200 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 LCN10Q6JVE6 187 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 PARS2Q7L3T8 475 aaKnown RBP11.27□□□□□ -0.6
TSKU-203ENST00000527881 SLC16A9Q7RTY1 509 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 PHOSPHO2Q8TCD6 241 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 TOX2Q96NM4 488 aa11.27□□□□□ -0.6
TSKU-203ENST00000527881 GPANK1O95872 356 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 SCGB1D2O95969 90 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 F13BP05160 661 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 NPY4RP50391 375 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 CCR4P51679 360 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 DBX2Q6ZNG2 339 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 SLC43A2Q8N370 569 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 ZNF610Q8N9Z0 462 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 LINC01555Q8NAE3 123 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 OR9K2Q8NGE7 335 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 SUSD6Q92537 303 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 PPP1R14AQ96A00 147 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 FAM83CQ9BQN1 747 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 EPHX3Q9H6B9 360 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 ENTPD2Q9Y5L3 495 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 TRBV5-5A0A0J9YX44 114 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 A0A1W2PRU2 124 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 MELTFP08582 738 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 PET100P0DJ07 73 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 SCAND1P57086 179 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 OR8G1Q15617 311 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 SLC35D3Q5M8T2 416 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 PRSS54Q6PEW0 395 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.27□□□□□ -0.61
TSKU-203ENST00000527881 NAXEQ8NCW5 288 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
TSKU-203ENST00000527881 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
TSKU-203ENST00000527881 EFSO43281 561 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 CDKN2AP42771 156 aaKnown RBP11.26□□□□□ -0.61
TSKU-203ENST00000527881 RASGEF1BQ0VAM2 473 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ARHGAP19Q14CB8 494 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 DPY19L2P2Q6ZN68 376 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ZNF681Q96N22 645 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ATG101Q9BSB4 218 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 TAS2R4Q9NYW5 299 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 CES1P1Q9UKY3 287 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 YBX2Q9Y2T7 364 aaKnown RBP11.26□□□□□ -0.61
TSKU-203ENST00000527881 SCN5AQ14524 2016 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 A0A0B4J2E0 115 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 A0A1B0GX12 115 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 LYPD3O95274 346 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 GRK6P43250 576 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ARRB1P49407 418 aaPredicted RBP11.26□□□□□ -0.61
TSKU-203ENST00000527881 CTXN1P60606 82 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 FKBP1BP68106 108 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 NTHL1P78549 312 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 DEFB134Q4QY38 66 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 WDR38Q5JTN6 314 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 SOHLH1Q5JUK2 328 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 BTNL8Q6UX41 500 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 MR1Q95460 341 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ZNF587Q96SQ5 575 aaPredicted RBP11.26□□□□□ -0.61
TSKU-203ENST00000527881 TRIM2Q9C040 744 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 UCK1Q9HA47 277 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ELOVL3Q9HB03 270 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 SEC14L6B5MCN3 397 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 SULT1A2P50226 295 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 TOMM34Q15785 309 aaPredicted RBP11.26□□□□□ -0.61
TSKU-203ENST00000527881 ITPRIPL2Q3MIP1 535 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 TPGS2Q68CL5 300 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 SPNS3Q6ZMD2 512 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 MDGA2Q7Z553 956 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 ZAR1Q86SH2 424 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 SLC25A44Q96H78 314 aaPredicted RBP11.26□□□□□ -0.61
TSKU-203ENST00000527881 NMES1Q9C002 83 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 TUBA4BQ9H853 241 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 WDR76Q9H967 626 aa11.26□□□□□ -0.61
TSKU-203ENST00000527881 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 IFITM10A6NMD0 228 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 LDB3O75112 727 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 OR6A2O95222 327 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
TSKU-203ENST00000527881 GDI1P31150 447 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms