RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ASH2LQ9UBL3 628 aa16.36■□□□□ 0.21
PKP3-204ENST00000526971 EIF3KQ9UBQ5 218 aaKnown RBP16.36■□□□□ 0.21
PKP3-204ENST00000526971 NDRG4Q9ULP0 352 aaKnown RBP16.36■□□□□ 0.21
PKP3-204ENST00000526971 FZR1Q9UM11 496 aa16.36■□□□□ 0.21
PKP3-204ENST00000526971 SGCEO43556 437 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 DEAF1O75398 565 aaPredicted RBP16.35■□□□□ 0.21
PKP3-204ENST00000526971 CIB2O75838 187 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 TFP02787 698 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 LCKP06239 509 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 ANXA8P13928 327 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 PRKACGP22612 351 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 WNT5AP41221 380 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 ARHGDIAP52565 204 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 MEP1BQ16820 701 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 SLC36A3Q495N2 470 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 SHQ1Q6PI26 577 aaKnown RBP16.35■□□□□ 0.21
PKP3-204ENST00000526971 VASH1Q7L8A9 365 aaPredicted RBP16.35■□□□□ 0.21
PKP3-204ENST00000526971 CYB561A3Q8NBI2 242 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 SLC37A3Q8NCC5 494 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 TEX47Q8TBZ9 253 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 NRBF2Q96F24 287 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 DUS3LQ96G46 650 aaKnown RBP16.35■□□□□ 0.21
PKP3-204ENST00000526971 RAB1BQ9H0U4 201 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 CHODLQ9H9P2 273 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 ZNF556Q9HAH1 456 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 DYNLRB1Q9NP97 96 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 DUSP13Q9UII6 198 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 KLHL21Q9UJP4 597 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 POLR1DQ9Y2S0 133 aa16.35■□□□□ 0.21
PKP3-204ENST00000526971 H3BN98 237 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 SYNGR3O43761 229 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 DOK2O60496 412 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 ICMTO60725 284 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 ADRA2AP08913 450 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 CSF3P09919 207 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 ZNF250P15622 560 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 ERVS71-1P61550 626 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 HIST1H3AP68431 136 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 TEKQ02763 1124 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 GGTLC2Q14390 218 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 ATP6AP1Q15904 470 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 CCDC92Q53HC0 331 aaPredicted RBP16.34■□□□□ 0.21
PKP3-204ENST00000526971 HIST2H3PS2Q5TEC6 136 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 UNQ6126/PRO20091Q6UXV3 157 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 HIST2H3AQ71DI3 136 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.34■□□□□ 0.21
PKP3-204ENST00000526971 ZNF101Q8IZC7 436 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 OR1J1Q8NGS3 322 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 OR2T4Q8NH00 348 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 MSI2Q96DH6 328 aaKnown RBP16.34■□□□□ 0.21
PKP3-204ENST00000526971 RBM4Q9BWF3 364 aaKnown RBP16.34■□□□□ 0.21
PKP3-204ENST00000526971 PLEK2Q9NYT0 353 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 AP4S1Q9Y587 144 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 LHFPL6Q9Y693 200 aa16.34■□□□□ 0.21
PKP3-204ENST00000526971 M0R233 179 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 EBAG9O00559 213 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 RER1O15258 196 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 IFNGP01579 166 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 OSMP13725 252 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 SRD5A1P18405 259 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 THBS2P35442 1172 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 HTR5AP47898 357 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 SELENOVP59797 346 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 CRMP1Q14194 572 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 FAM120AOSQ5T036 256 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 C1orf174Q8IYL3 243 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 ZCCHC24Q8N2G6 241 aaKnown RBP16.33■□□□□ 0.2
PKP3-204ENST00000526971 IQCF1Q8N6M8 205 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 ATG16L2Q8NAA4 619 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 ICA1LQ8NDH6 482 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 PROKR2Q8NFJ6 384 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 GJC3Q8NFK1 279 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 OR1F12Q8NHA8 337 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 SYNPRQ8TBG9 265 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 C4orf45Q96LM5 186 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 NMNAT2Q9BZQ4 307 aa16.33■□□□□ 0.2
PKP3-204ENST00000526971 MYEF2Q9P2K5 600 aaKnown RBP16.33■□□□□ 0.2
PKP3-204ENST00000526971 IGLV3-9A0A075B6K5 115 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 IGHV4-61A0A0C4DH41 118 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 A0A1W2PPW3 197 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 OR6C6A6NF89 314 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 RIIAD1A6NNX1 92 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 CLPTM1O96005 669 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 HLA-DQA2P01906 255 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 ERCC1P07992 297 aaPredicted RBP16.32■□□□□ 0.2
PKP3-204ENST00000526971 FASP25445 335 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 POU1F1P28069 291 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 PYCR1P32322 319 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 GRK5P34947 590 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 ALDH3B1P43353 468 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 NR4A2P43354 598 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 GZMKP49863 264 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 SLC25A1P53007 311 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 KLF3P57682 345 aaPredicted RBP16.32■□□□□ 0.2
PKP3-204ENST00000526971 FAM166AQ6J272 317 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 ARL9Q6T311 187 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 OR9Q1Q8NGQ5 310 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 OR5K1Q8NHB7 308 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 ABHD4Q8TB40 342 aa16.32■□□□□ 0.2
PKP3-204ENST00000526971 ZNRF4Q8WWF5 429 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms