RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ZNF32P17041 273 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 APOBEC3AP31941 199 aaPredicted RBP8.75□□□□□ -1.01
VPS28-204ENST00000526054 PYCR1P32322 319 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 BLVRAP53004 296 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 AQP6Q13520 282 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 ENDOGQ14249 297 aaKnown RBP8.75□□□□□ -1.01
VPS28-204ENST00000526054 PTGES3Q15185 160 aaKnown RBP8.75□□□□□ -1.01
VPS28-204ENST00000526054 KCNMB1Q16558 191 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 TBC1D28Q2M2D7 210 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 PABPC1L2AQ5JQF8 200 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 ZNF362Q5T0B9 420 aaPredicted RBP8.75□□□□□ -1.01
VPS28-204ENST00000526054 ACSM5Q6NUN0 579 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 ALDH16A1Q8IZ83 802 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 CBR4Q8N4T8 237 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 SLC30A7Q8NEW0 376 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 SLC26A10Q8NG04 563 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 OR4F15Q8NGB8 312 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 OR9Q1Q8NGQ5 310 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 OR1J2Q8NGS2 313 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 FGFBP3Q8TAT2 258 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 C11orf40Q8WZ69 217 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 EME1Q96AY2 570 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 OTULINQ96BN8 352 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 FBXO17Q96EF6 278 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 ZNF75AQ96N20 296 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 DDOQ99489 341 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 BEX2Q9BXY8 128 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 OR2H1Q9GZK4 316 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 SHARPINQ9H0F6 387 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 RIBC2Q9H4K1 309 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 CDH20Q9HBT6 801 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 TMEM160Q9NX00 188 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 TVP23BQ9NYZ1 205 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 USE1Q9NZ43 259 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 LPAR3Q9UBY5 353 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 TMEFF2Q9UIK5 374 aaPredicted RBP8.75□□□□□ -1.01
VPS28-204ENST00000526054 KCNG2Q9UJ96 466 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 MOKQ9UQ07 419 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 TIMM10BQ9Y5J6 103 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 PMF1-BGLAPU3KQ54 211 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 ARFGEF3Q5TH69 2177 aa8.75□□□□□ -1.01
VPS28-204ENST00000526054 IGHV2OR16-5A0A0B4J2B6 119 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 ZAR1LA6NP61 321 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 DOK2O60496 412 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 ALPLP05186 524 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 SCG5P05408 212 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 IGHV4-31P0DP07 118 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 ZNF823P16415 610 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 SPI1P17947 270 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 USF1P22415 310 aaPredicted RBP8.74□□□□□ -1.01
VPS28-204ENST00000526054 CALCRP30988 508 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 FMO3P31513 532 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 APLNRP35414 380 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 VHLP40337 213 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 SNRPD2P62316 118 aaKnown RBP8.74□□□□□ -1.01
VPS28-204ENST00000526054 PSG4Q00888 419 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 GALK2Q01415 458 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 TEKQ02763 1124 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 GGTLC2Q14390 218 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 SNAPC1Q16533 368 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 SLX4IPQ5VYV7 408 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 TMEM236Q5W0B7 351 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 CYB5R2Q6BCY4 276 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 UGT2A3Q6UWM9 527 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 ZBTB49Q6ZSB9 765 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.74□□□□□ -1.01
VPS28-204ENST00000526054 MYPOPQ86VE0 399 aaPredicted RBP8.74□□□□□ -1.01
VPS28-204ENST00000526054 OR6K6Q8NGW6 343 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 MS4A3Q96HJ5 214 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 PIMREGQ9BSJ6 248 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 CDADC1Q9BWV3 514 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 NMNAT2Q9BZQ4 307 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 VCXQ9H320 206 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 C8orf4Q9NR00 106 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 ASH2LQ9UBL3 628 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 NDRG4Q9ULP0 352 aaKnown RBP8.74□□□□□ -1.01
VPS28-204ENST00000526054 SPEF1Q9Y4P9 236 aa8.74□□□□□ -1.01
VPS28-204ENST00000526054 FAM183AA6NL82 134 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 PRODHO43272 600 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 SGCEO43556 437 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 MPZL1O95297 269 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 GPANK1O95872 356 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
VPS28-204ENST00000526054 GYPBP06028 91 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 STOMP27105 288 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 APEX1P27695 318 aaKnown RBP8.73□□□□□ -1.01
VPS28-204ENST00000526054 PEX2P28328 305 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 GZMKP49863 264 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 GDI2P50395 445 aaKnown RBP8.73□□□□□ -1.01
VPS28-204ENST00000526054 PDLIM4P50479 330 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 RPS23P62266 143 aaKnown RBP8.73□□□□□ -1.01
VPS28-204ENST00000526054 SNTB2Q13425 540 aaKnown RBP8.73□□□□□ -1.01
VPS28-204ENST00000526054 CARTPTQ16568 116 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 MEP1BQ16820 701 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 LRRC36Q1X8D7 754 aa8.73□□□□□ -1.01
VPS28-204ENST00000526054 OGFRL1Q5TC84 451 aaPredicted RBP8.73□□□□□ -1.01
VPS28-204ENST00000526054 LPCAT4Q643R3 524 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms