RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 SELENOFO60613 162 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ENTPD6O75354 484 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 LYNP07948 512 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 APEX1P27695 318 aaKnown RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 NAA10P41227 235 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ISL1P61371 349 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 EIF2B1Q14232 305 aaKnown RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CCDC92Q53HC0 331 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ADAM5Q6NVV9 412 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CORO6Q6QEF8 472 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ZNF704Q6ZNC4 412 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CFAP77Q6ZQR2 320 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 MYPOPQ86VE0 399 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 TMEM200AQ86VY9 491 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CDC20BQ86Y33 519 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ZNF295-AS1Q8N0V1 137 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 OR1F12Q8NHA8 337 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ST7LQ8TDW4 575 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ANKRD60Q9BZ19 345 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CLEC4MQ9H2X3 399 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ADGRL4Q9HBW9 690 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 RPL36Q9Y3U8 105 aaKnown RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 PLCE1Q9P212 2302 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 J3QW42 95 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ICMTO60725 284 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CLIC3O95833 236 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 SBK2P0C263 348 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ZNF35P13682 527 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 PCSK6P29122 969 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ATP6V1E1P36543 226 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 SLC15A1P46059 708 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 KCTD18Q6PI47 426 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 THAP5Q7Z6K1 395 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 CPEB3Q8NE35 698 aaKnown RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 OR51G2Q8NGK0 314 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 ASB17Q8WXJ9 295 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 MAP6Q96JE9 813 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 POM121L2Q96KW2 1035 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 MYCBPQ99417 103 aaPredicted RBP16.22■□□□□ 0.19
PTPRK-218ENST00000525459 Q9H521 79 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 LAMP5Q9UJQ1 280 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 POU2F3Q9UKI9 436 aa16.22■□□□□ 0.19
PTPRK-218ENST00000525459 IRGMA1A4Y4 181 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 GNAO1P09471 354 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 RPS23P62266 143 aaKnown RBP16.21■□□□□ 0.19
PTPRK-218ENST00000525459 ACTC1P68032 377 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 ACTA1P68133 377 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 C6orf52Q5T4I8 152 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 OTPQ5XKR4 325 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 ZNF787Q6DD87 383 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 NUP37Q8NFH4 326 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 APH1BQ8WW43 257 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 SPTSSAQ969W0 71 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 SLAMF6Q96DU3 332 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 HS3ST6Q96QI5 342 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 ABHD6Q9BV23 337 aa16.21■□□□□ 0.19
PTPRK-218ENST00000525459 C5orf49A4QMS7 147 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 ATP6V1G2-DDX39BF2Z307 99 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 WBP4O75554 376 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 APOC1P02654 83 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 MRPL3P09001 348 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 DBTP11182 482 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 RPS27P42677 84 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 RGS6P49758 472 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 GRB2P62993 217 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 ZNF91Q05481 1191 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 B3GLCTQ6Y288 498 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 SLC35F2Q8IXU6 374 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 FBLIM1Q8WUP2 373 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 RNF133Q8WVZ7 376 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 BCL2L14Q9BZR8 327 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 ELOVL3Q9HB03 270 aa16.2■□□□□ 0.18
PTPRK-218ENST00000525459 PNRC2Q9NPJ4 139 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 EIF3KQ9UBQ5 218 aaKnown RBP16.2■□□□□ 0.18
PTPRK-218ENST00000525459 SHISA9B4DS77 424 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 OR2T7P0C7T2 308 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 ALOX5APP20292 161 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 MYF6P23409 242 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 CALCRP30988 508 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 RAB40BQ12829 278 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 KLHL22Q53GT1 634 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 DEGS2Q6QHC5 323 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 KBTBD8Q8NFY9 601 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 OR2T27Q8NH04 317 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 RNFT2Q96EX2 444 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 COG8Q96MW5 612 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 NIPAL2Q9H841 368 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 HECTD1Q9ULT8 2610 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 LOC100509620A0A075B734 347 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 VSTM5A8MXK1 200 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 ZNF670-ZNF695F2Z2N8 137 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 PSKH1P11801 424 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 TUBG1P23258 451 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 RAD52P43351 418 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 CSNK2BP67870 215 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 SPOCK1Q08629 439 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 TAF13Q15543 124 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 ZNF672Q499Z4 452 aaPredicted RBP16.19■□□□□ 0.18
PTPRK-218ENST00000525459 TMEM154Q6P9G4 183 aa16.19■□□□□ 0.18
PTPRK-218ENST00000525459 CNIH3Q8TBE1 160 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms