RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RUNX3Q13761 415 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 RNF113BQ8IZP6 322 aaKnown RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 OR1L4Q8NGR5 311 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FAM221AA4D161 298 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF716A6NP11 495 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FGF4P08620 206 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 TCN2P20062 427 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 OR52I2Q8NH67 350 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 SRPK3Q9UPE1 567 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 SFTA3P0C7M3 94 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 GCSHP23434 173 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 HTR1DP28221 377 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 POLR2IP36954 125 aaKnown RBP12.55□□□□□ -0.4
LRRK1-202ENST00000525284 KIR2DL3P43628 341 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FFAR4Q5NUL3 377 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 FAAP20Q6NZ36 180 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 MBOAT2Q6ZWT7 520 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 LRP11Q86VZ4 500 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 TP53INP2Q8IXH6 220 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 DEFB108BQ8NET1 73 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 IGSF21Q96ID5 467 aa12.55□□□□□ -0.4
LRRK1-202ENST00000525284 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TUBAL3A6NHL2 446 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 PRSS1P07477 247 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 RGRP47804 291 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 AANATQ16613 207 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TIMD4Q96H15 378 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 IL17BQ9UHF5 180 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 CCDC187A0A096LP49 1063 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 M0R1X1 148 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 HOXC11O43248 304 aaPredicted RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 WNT11O96014 354 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 CSF2RBP32927 897 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 KIR2DS3Q14952 304 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 MRPS24Q96EL2 167 aaKnown RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 ADGRG7Q96K78 797 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TAS2R4Q9NYW5 299 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 RPS19P39019 145 aaKnown RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 BTG1P62324 171 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 CADM3Q8N126 398 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 CLMPQ9H6B4 373 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 SFXN1Q9H9B4 322 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 USP22Q9UPT9 525 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 UBE2L5PA0A1B0GUS4 154 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 E5RGE8 158 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 PRAMEF26H0Y7S4 382 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 K7ERU9 68 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 RING1Q06587 406 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 GAMTQ14353 236 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 DGAT2L7PQ6IED9 249 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TMEM116Q8NCL8 245 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TMEM255BQ8WV15 326 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 OR10C1Q96KK4 312 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 HES7Q9BYE0 225 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 EN2P19622 333 aaPredicted RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 EGLN2Q96KS0 407 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 UTP23Q9BRU9 249 aaKnown RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 SLAMF8Q9P0V8 285 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 CLEC2DQ9UHP7 191 aa12.54□□□□□ -0.4
LRRK1-202ENST00000525284 DIMT1Q9UNQ2 313 aaKnown RBP12.54□□□□□ -0.4
LRRK1-202ENST00000525284 TRAV36DV7A0A075B6V5 113 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 NPIPB15A6NHN6 443 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-202ENST00000525284 M0R143 59 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 CYR61O00622 381 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 GUSBP08236 651 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 HTR1FP30939 366 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 SDHAP31040 664 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-202ENST00000525284 SOX18P35713 384 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 PXNP49023 591 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-202ENST00000525284 CDKN3Q16667 212 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 ERGIC1Q969X5 290 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 ISG20Q96AZ6 181 aaKnown RBP12.53□□□□□ -0.4
LRRK1-202ENST00000525284 C3orf30Q96M34 536 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 CMTM3Q96MX0 182 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 RTL8AQ9BWD3 113 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 SLC17A4Q9Y2C5 497 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 OR51B4Q9Y5P0 310 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF141Q15928 474 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 ATP6V1FQ16864 119 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 CTSFQ9UBX1 484 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 GPR45Q9Y5Y3 372 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 KIF1AQ12756 1690 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 M0R2Z0 102 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 CBR3O75828 277 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 CHRM2P08172 466 aa12.53□□□□□ -0.4
LRRK1-202ENST00000525284 ZNF25P17030 456 aaPredicted RBP12.53□□□□□ -0.4
LRRK1-202ENST00000525284 HIST1H1TP22492 207 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms